KEGG   Streptomyces cyaneogriseus: TU94_21880
Entry
TU94_21880        CDS       T03687                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03090  RNA polymerase sigma-B factor
Organism
scw  Streptomyces cyaneogriseus
Brite
KEGG Orthology (KO) [BR:scw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scw03021]
    TU94_21880
Transcription machinery [BR:scw03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     TU94_21880
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 HTH_23 DUF7343 Sigma70_ECF HTH_24 MarR_2 NirdL-like_HTH MarR IF2_N HTH_5 HTH_3 HTH_Crp_2 GerE HTH_AraC HTH_28
Other DBs
NCBI-ProteinID: AJP05817
UniProt: A0A0C5G0C0
LinkDB
Position
complement(5130824..5131648)
AA seq 274 aa
MSEHERHSEDEAPAARGAQGTHDPQDRSGARALFAELRTLGKDSPEYAELRNRLVRMHLP
LVEHLARRFRNRGEPLDDLTQVATIGLIKSVDRFDPDRGVEFSTYATPTVVGEIKRHFRD
KGWAVRVPRRLQELRLSLTTATAELSQLHGRSPTVHELAEKLAISEEEVLEGLESANAYS
TLSLDVPDTDDESPAVADTLGAEDEALEGVEYRESLKPLLEDLPPREKRILLLRFFGNMT
QSQIAQEVGISQMHVSRLLARTLAQLREKLLVEE
NT seq 825 nt   +upstreamnt  +downstreamnt
atgagcgagcacgagcgacactccgaggacgaggcaccggccgcgcgcggcgcgcagggt
acgcacgacccgcaggaccgcagcggggcgcgcgccctcttcgccgagctgcgcacgctg
gggaaggacagccccgagtacgcggagctgcgcaaccggctggtccggatgcacctgccg
ctcgtcgagcacctcgcgcgccgcttccgcaaccgcggcgagccgctggacgacctgacc
caggtcgccaccatcgggctgatcaagtccgtcgaccgcttcgacccggaccgcggggtg
gagttctcgacgtacgcgacaccgacggtggtcggcgagatcaagcggcacttccgcgac
aagggctgggcggtgcgggtgccgcgccggctccaggagctgcgcctgtccctgacgacg
gccacggcggagctctcgcagctgcacggccgctcccccacggtccacgagctcgcggag
aagctggcgatctcggaggaggaggtcctggagggcctggagtccgcgaacgcgtactcc
acgctctccctggacgtgcccgacaccgacgacgagtccccggcggtcgccgacaccctc
ggcgccgaggacgaggcgctggagggcgtggagtaccgggagtcgctcaaaccgctgctg
gaggacctgccgccgcgcgagaagcggatcctgctgttgcgcttcttcggcaacatgacc
cagtcgcagatcgcgcaggaggtcgggatctcccagatgcacgtctcccggctgctggcg
cgcaccctggcgcagcttcgggagaagctcctcgtggaggaatag

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