Streptomyces cyaneogriseus: TU94_25395
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Entry
TU94_25395 CDS
T03687
Name
(GenBank) RNA polymerase sigma factor rpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
scw
Streptomyces cyaneogriseus
Pathway
scw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
scw00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
TU94_25395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scw03021
]
TU94_25395
Transcription machinery [BR:
scw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TU94_25395
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
HTH_15
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AJP04303
UniProt:
A0A0C5G2U0
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All DBs
Position
6031824..6033002
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AA seq
392 aa
AA seq
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MLARYADADGKVGKLAHDGVVRLHGLSPAEARELAEAFPINRPRPPRSVTQPMEGNKTDK
SAPCRSTSASPKPPTGKKRAARSSVSTASGGLSDAVRAARAVLEADRWRRTPGKALLTAD
EEVGLAVLLRDGADHLGRDVPAEEIRALPRDCERWRAYECLVLHNQRLVWKIAHGYQGNG
LDIEDLVQHGTLGLMRAVRKFDATKGFKLSTYATWWIRQSISRAIADEGTTIRMPVYIHE
RVSKVAAAERKLLSEGRPRTVDNLAYATGLTFAEVEEVRRISRPTDSLDRIIGDDTAFGD
LIVGPSRLPGPPVVLLRKELQARLRHVLEHLTERERHVLVRRTGLDGDEPDTLEDIGVVF
SVTRERIRQIESKAKAKFRGQLIRHGLIPSHL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgttggcccgctacgccgacgccgacggcaaggtcggcaagctggctcacgacggtgtc
gtgcggctgcacgggctcagccccgccgaagcgcgtgagctggcggaggcattcccgatc
aaccggccccgtccaccccgctcggtcacccagccgatggagggtaacaagacggacaag
tccgcaccttgcaggtccacttcggcgtcccccaagccgcctaccggcaagaagcgcgcc
gcccgctcctctgtctccaccgcgtccggcgggctttcggacgccgtccgcgcggcccgg
gccgtgctggaagccgaccggtggcgacggaccccgggcaaggcgttgctcacggcggac
gaggaagtcggcctcgccgtgctcctgcgcgacggcgccgaccaccttggccgcgacgtg
ccggcggaggagatcagggcgctcccccgggactgcgagcggtggcgtgcctacgagtgc
ctcgtcctgcacaaccagcggctcgtgtggaagatcgcgcacggttaccaggggaacgga
ctggacatcgaggacctcgtccagcacggcaccctcggactgatgcgcgcggtccgcaag
ttcgacgccaccaagggcttcaagctgtcgacctacgcgacgtggtggatcaggcagtcc
atcagccgcgccatcgccgacgagggcaccacgatccggatgcccgtgtacatccacgaa
agggtgagcaaggtcgccgcggccgagcgcaaactgctgagcgagggccggcccaggacc
gttgacaacctggcctacgcgaccggtctcaccttcgccgaagtggaggaggtgcgccga
atcagcaggcccaccgattccctggaccggatcatcggggacgacacggccttcggtgac
ctgatcgtcgggccgagccggctgcccgggcctccggtcgtgctgctccgcaaggagctt
caggcacgtctgcggcacgttctggagcacctcaccgaacgtgagcggcacgtcctcgtc
cggcgcaccggactcgacggcgacgagccggacacgctggaggacatcggcgtcgtcttc
agcgtcactcgggagcgcatccgccagatcgaatcgaaggccaaggccaaattccgcggc
cagctgatccgccacgggctcatcccgtcgcacctttga
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