Streptomyces cyaneogriseus: TU94_25630
Help
Entry
TU94_25630 CDS
T03687
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
scw
Streptomyces cyaneogriseus
Brite
KEGG Orthology (KO) [BR:
scw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scw03016
]
TU94_25630
Enzymes [BR:
scw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
TU94_25630
Transfer RNA biogenesis [BR:
scw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
TU94_25630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AJP04342
UniProt:
A0A0C5FW94
LinkDB
All DBs
Position
complement(6110721..6112007)
Genome browser
AA seq
428 aa
AA seq
DB search
MTDAHETAADRSLRTTGGAPPDDGGPSAAEAPIPLLEPREGIPPVIADETSLARVTAAFA
AGSGPVAVDAERASGYRYGQRAYLVQLRRQGAGTALIDPVACPDLSALGEALSGAEWVLH
AATQDLPCLRDIGMVPTRLFDTELAGRLAGFPRVGLGAMVEGVLGFVLEKGHSAVDWSTR
PLPEPWLRYAALDVELLVDLRDALEKELDRQGKLDWARQEFDAIAAAPPPEPRKEPWRRT
SGMHKVRRRRQLAAVREMWEARDRIAQRRDVSPGKVLSDAAIVEAATALPPNAHALAALN
GFGHRMGRRTLEQWQAAIDRARALPESALPQPGQPVTGPPPPRAWADKDPVAAARLSAAR
AGVSALAEELNMPQENLITPDTVRRVCWEPPKPLDAESVAAALAGYGARPWQVEQVTPVL
LAALSAHP
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcccacgagaccgcagcagaccgttcactgcgaaccaccggaggcgcccct
ccggacgacggcggaccgtctgccgccgaggcgccgatccccttgctcgaaccccgcgag
ggcattccgcccgtgatcgccgacgagacctccctggcccgggtgaccgccgccttcgcc
gccgggtccgggcccgtcgccgtcgacgccgagcgcgcctccggataccgctacgggcag
cgcgcctacctggtgcagctccgccgccagggcgccgggacggcgctcatcgaccccgtc
gcctgccccgacctgtccgctctgggcgaggccctgtccggcgcggagtgggtgctgcac
gccgccacccaggacctgccctgcctgcgcgacataggcatggtgcccacccggctgttc
gacaccgagctggccgggcggctcgccggcttcccgcgggtcggcctcggcgcgatggtc
gagggcgtcctgggcttcgtactggagaaggggcactccgccgtcgactggtcgacgcgc
ccgctgcccgagccgtggctgcgctacgccgccctggacgtcgagctcctggtcgacctg
cgcgacgcgctggagaaggagctggaccggcagggcaagctggactgggcccggcaggag
ttcgacgccatcgccgccgcgccgccgcccgagccgcgcaaggagccgtggcgccgtacg
tccggcatgcacaaggtgcgccggcggcgccagctcgccgccgtgcgggagatgtgggag
gcccgggaccggatcgcgcagcgccgggacgtctcgccgggcaaggtgctctccgacgcg
gccatcgtcgaggccgcgaccgccctgccgcccaacgcgcacgcgctcgccgcgctcaac
gggttcgggcaccgcatggggcggcggacgctggagcagtggcaggccgcgatcgaccgc
gccagggcactgccggagtccgcgctgccgcagccgggacagccggtgaccgggccgccc
ccgccgcgcgcctgggccgacaaggacccggtcgccgccgcccgcctgtcggcggcccgc
gccggggtgagcgcgctggccgaggagctgaacatgccgcaggagaacctgatcacgccg
gacacggtgcgccgggtctgctgggagccgccgaagcccctcgacgccgagtcggtggcc
gccgcgctcgccgggtacggggcccggccctggcaggtggagcaggtgacgcccgtgctg
ctcgccgccctgtcggcccacccctga
DBGET
integrated database retrieval system
