Streptomyces cyaneogriseus: TU94_30525
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Entry
TU94_30525 CDS
T03687
Name
(GenBank) RNA ligase
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
scw
Streptomyces cyaneogriseus
Brite
KEGG Orthology (KO) [BR:
scw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scw03016
]
TU94_30525
Enzymes [BR:
scw01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
TU94_30525
Transfer RNA biogenesis [BR:
scw03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
TU94_30525
Prokaryotic type
tRNA splicing ligases
TU94_30525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AJP05969
UniProt:
A0A0C5GC89
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All DBs
Position
7255931..7257343
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AA seq
470 aa
AA seq
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MELVEERPCRYRIERHGAMRVPGVVFASRDLLADAEKSLAQVVNVATVPGIVGASYAMPD
IHWGYGFPIGGVAATDVDEGGVVSPGGVGFDISCGVRLLAADARGGELRRALPAVMDGLD
RAIPRGAGPGGVWRPSGAGPLERILADGSRYAVEEGYGEERDLARCEDGGAVAGADVTQV
GERARQRGLAQVGSLGSGNHFLEVQQVAEVYDTAVAEAFGLTDGQVCVMIHCGSRGLGHQ
ICTDHVRAMDRAMARYGITVPDRQLACAPVDSPEGEAYLGAMAAAANYGRANRQLLTHAA
REVFRRAAGARLSLVYDVSHNLAKAETHDVAGRPRRLCVHRKGATRAFPPGHPELPPDLR
RSGQPVLIPGTMGTASYVLTGVIGGDAFHSTCHGAGRVLSRHQAARAVTGKEVRARLDAA
GIAVRPRSWRGLAEETPEAYKDVSAVVAASERAGLCRTVARLVPLGVVKG
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggaactggtcgaggagcgcccctgccgctaccgcatcgagcggcacggcgcgatgcgg
gtgcccggcgtggtgttcgcctcccgtgatctgctggccgacgccgagaagtccttggcg
caggtcgtcaacgtggccacggtgccgggcatcgtgggcgcctcgtacgccatgccggac
atccactggggctacggcttcccgatcggcggcgtggccgccaccgacgtcgacgagggc
ggcgtcgtctcgcccggcggggtcggcttcgacatctcctgcggggtgcggctgctggcc
gccgacgcccggggcggggagctgcggcgggccctgcccgccgtcatggacggcctggac
cgggcgatcccgcgcggcgcgggccccggcggcgtatggcggccctccggcgccggaccg
ctggagcggatcctcgcggacggctcccggtacgcggtggaggaggggtacggcgaggaa
cgcgacctcgcccgctgcgaggacggcggcgcggtcgccggtgccgatgtgacgcaggtc
ggcgagcgggcccggcagcgcggtctggcccaggtgggcagcctcgggtcgggaaaccac
ttcctggaggtccagcaggtcgccgaggtctacgacacggcggtcgccgaggcgttcggg
ctcaccgacggacaggtgtgcgtgatgatccactgcggctcgcggggcctgggacaccag
atctgcaccgaccacgtccgggcgatggaccgcgccatggcccgctacggcatcaccgtc
cccgaccggcagctggcctgcgccccggtcgactcgcccgagggggaggcgtacctgggc
gcgatggccgccgccgccaactacggccgcgccaaccgccagctcctcacccacgcggcc
cgggaggtgttccggcgggccgcgggcgcgcggctgtcgctggtgtacgacgtgtcccac
aacctggccaaggccgagacgcacgacgtggcgggacggccccgccggctctgcgtgcac
cgcaagggagccacccgcgccttcccgccgggccacccggaactgccgccggatctgcgc
cggtccgggcagccggtgctgatccccggcaccatgggcaccgcctcctacgtgctgacc
ggggtcatcggcggcgacgccttccactccacctgccacggcgcgggccgggtgctcagc
cgccaccaggccgcccgcgcggtcaccggcaaggaggtgcgggccaggctcgacgcggcc
ggcatcgcggtgcgcccgcgttcctggcgcggcctggccgaggagacgcccgaggcgtac
aaggacgtgagcgcggtggtggccgcgagcgagcgtgccgggctgtgccgcacggtggcc
cggctggtgccgctgggggtggtcaagggctga
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