Streptomyces sp. CdTB01: AS200_00635
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Entry
AS200_00635 CDS
T04240
Name
(GenBank) DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
scx
Streptomyces sp. CdTB01
Pathway
scx03030
DNA replication
scx03430
Mismatch repair
scx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AS200_00635
03430 Mismatch repair
AS200_00635
03440 Homologous recombination
AS200_00635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scx03032
]
AS200_00635
03400 DNA repair and recombination proteins [BR:
scx03400
]
AS200_00635
Enzymes [BR:
scx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AS200_00635
DNA replication proteins [BR:
scx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AS200_00635
DNA repair and recombination proteins [BR:
scx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AS200_00635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TerD
RNase_T
PTCB-BRCT
BRCT
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ALV38276
LinkDB
All DBs
Position
complement(165757..167559)
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AA seq
600 aa
AA seq
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MSVMPTRADGLSSLPGDPAWAVVDVETSGLRPYQHRVLSVAVLTLDASGKLTEEFSTLLD
PECDPGPVHIHGLTPQRLRGAPTFEQVADRIGALLSGRILVAHNAQFDYEFLAHEFARAR
SWLPVSQRLCTLALNLRIGPPTDDLKLASLASFYGVRQRQAHDALDDARVLAGVLRGSLA
AAGELGLQLPVVACPPKQGIGYPPRVPKTPCAFRNPGPLAPGAPLVQGMKVAFTGDTHAA
REELVARAVAAGLNVVGSVSRHTSVLITNDRAGDTAKARAAHSAGVPLIGEADFLALLAD
IRPGTTHPTSDAAIPAPHSSRPSATPAAVGALAGRRILVLGGPHDQAAAVRSRVAGLGGA
AAVNLSASVTDVIVLPGGEHDRRMPRITDRGMPVHADDWLDTLDLATVSGSDGTPAPLPR
ADTVRVLPRGGVIDLPTQQEDPQCWRVSAAWAHQANKEVDVVAFIVDEDEQVSCDEDFVF
YGAPESPGSAVQLVTEGPNEQAIVVELSALPAAAHKVVVAAALDGAGTFADVGAIEIMVV
PASGEQAVAQATLDAATTERSLVLAEIYRRGPLWRIRAVGQGHDHDLATTARSFGVDITD
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgatgccgacccgtgccgatggtctttcgagcctgccgggcgatccagcctgg
gcggtggtggatgtggagacctcggggctgaggccctatcagcaccgggtgctgtcggtg
gcggtgctgacgctggacgcgtcggggaagctgacggaggagttttccaccctgctcgat
ccggaatgcgaccccggcccggtccacatccacggcctgaccccacagcggctgcgcggc
gcacccacgttcgagcaggtcgccgaccggatcggcgcactgctctccggccggatcctg
gtggcgcacaacgcgcagttcgactacgagttcctggcgcacgagttcgcccgggcccgc
tcctggctgccggtgtcccagcgtctgtgcacgcttgcactcaacctgcgaatcgggccg
cccaccgacgatctgaaactggcctcactggcctctttctacggtgtgcggcaacggcag
gcgcacgacgcgctggatgacgcccgggtgctggccggtgtgctgcgcggctccttggcc
gcggccggcgaactgggccttcagctgccggtggtggcctgcccgcccaagcagggcatc
ggctatccgccccgcgtgcccaagacgccgtgtgccttccgcaatcccgggcctctcgcg
ccaggggcgccgttggtacaggggatgaaggtcgccttcactggggacacgcacgccgcc
cgtgaggaactggtggcccgtgcggtggctgcgggactcaatgtggtcggctccgtcagc
aggcacaccagcgtgctgatcaccaatgaccgcgccggtgacacggccaaggcccgcgcc
gcacacagcgcaggcgtccccctcatcggcgaggcggacttcctcgcgctgcttgccgac
atccggccaggcaccacccacccgacatcggacgccgcgatcccggccccgcacagcagc
cgtccgtccgccacgccggcggcggtgggggcgttggccggccgccgcatcctggttctg
ggcggcccgcatgaccaggcagccgccgtgcgctcccgcgtggccggcctgggcggcgcc
gcagccgtgaacctctcggccagtgtcaccgacgtcatcgtcctgcccggaggcgaacac
gatcgccgcatgccccgcatcaccgaccgcggcatgcccgttcacgccgacgactggctg
gacaccctggacctggccaccgtgtccggatcggacggcactcctgcgccgttgccccgg
gccgatacggtgcgtgttctgccccgcggcggtgtcattgacctccccacccagcaagaa
gaccctcagtgctggcgggtgagcgcggcgtgggcccaccaggccaacaaggaggtggac
gtggtcgcctttatcgtcgacgaagacgaacaggtctcctgcgatgaggacttcgtcttc
tacggcgccccggaaagccccggcagtgccgtccagttggtgaccgagggcccgaacgag
caggccatcgtcgtcgagctgagcgcgttgcccgccgccgcgcacaaggtcgttgtcgcg
gccgccctggacggagccggcacgttcgcagatgtcggagccattgagatcatggtggtg
cctgcctccggagaacaggccgtggcccaggccacgctggatgcggccaccacggaacgc
agcctggtgctggccgagatctaccgccgcggccctctctggcggatccgggccgtaggc
caggggcatgaccacgatttggcgaccaccgcccgctccttcggcgtcgacatcacggac
tga
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