Streptomyces sp. CdTB01: AS200_02920
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Entry
AS200_02920 CDS
T04240
Name
(GenBank) decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
scx
Streptomyces sp. CdTB01
Pathway
scx00300
Lysine biosynthesis
scx00470
D-Amino acid metabolism
scx01100
Metabolic pathways
scx01110
Biosynthesis of secondary metabolites
scx01120
Microbial metabolism in diverse environments
scx01230
Biosynthesis of amino acids
Module
scx_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
scx00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AS200_02920
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AS200_02920
Enzymes [BR:
scx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AS200_02920
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Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ALV31131
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Position
684552..685802
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AA seq
416 aa
AA seq
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MSVSPRHRDLAQRYGTPLYVYDLARVRAARRDLFGFLPEGVEVYYAFKANPHPDLVRALR
TGDGPACKAEISSTGELATALRAGYRGADILYTGPGKTAGELDEAMRGGVGLFSAESLGD
LEHIGRAALAHGTTAQCLLRINSVTASAASGVRMTGKPTQFGIDSETVRDSAAALTSVPG
TSVAGLHLFSQSNARDEESLLAEFRHTLETAARIQDELGVDLRVLDIGGGFSVPYGRTGE
RAVYPKLRGELAAALDVFFPGWRQGLPRIAVESGRYLVGDSGHLLTSVSNLKTGRGHTFA
VLDAGINVFGGMSGLGRLLPVSVEIPVDQDNRQVTLAGPLCTPGDVLGRNVTVPADLGPG
DLLAIPNTGAYGPTASLLMFLGRPSPVEVVVDGELTVSATRIERTRVAYDAEHKHG
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtcagcccccgccaccgcgacctcgcccagcggtacggcaccccgctgtacgtc
tacgacctggcccgggtgcgcgccgcgcgccgcgacctgttcggcttcctgcccgagggc
gtggaggtctactacgccttcaaggccaacccgcaccccgacctggtgcgcgcactgcgc
accggcgacgggcccgcctgcaaggcggagatcagctccaccggcgagctggccaccgcg
ctgcgggcgggctaccggggcgcggacatcctctacacggggccgggcaagacggcgggc
gaactcgacgaggccatgcgaggcggcgtgggcctgttctccgccgagtccctcggcgac
ctggagcacataggccgcgctgccctggcccacggcaccaccgcccagtgcctgctgcgc
atcaacagcgtcacggcgagtgccgccagcggggtgcgcatgaccggcaagcccacccag
ttcggcatcgacagtgagacggtccgcgacagcgccgcagcgctgacgtccgtgcccggc
acgtccgttgcggggctgcacctgttctcgcagagcaacgcccgcgacgaggagagcctg
ctggcggagttccggcacacgctggagacagccgcgcgcatccaggacgaactgggcgtg
gacctgcgcgtgctggacatcggcggcggcttctccgtgccctacggccgcaccggcgaa
cgcgccgtgtaccccaagctccgcggcgaactcgccgccgcactggacgtgttcttcccc
ggctggcgtcagggcctgccgcggatcgccgtggagtccggccgctacctcgtcggtgac
agcggccatctcctcacctcggtgagcaacctcaagaccgggcgcggccacaccttcgcc
gtgctggacgcgggcatcaacgtcttcggcgggatgtccggcctcggccggctgctgccc
gtctccgtggagatcccggtggatcaggacaaccgccaggtcaccctggccggcccgctg
tgcaccccgggcgacgtcctgggccgcaatgtaaccgtcccggccgatctggggcccggc
gacctcctcgcgatacccaacaccggcgcctacgggcccacggccagcctgctgatgttc
ctgggccggcccagtccggtggaagtcgtcgtcgacggtgagctcaccgtctccgccacc
cgcatcgaacgcacccgggtcgcctacgacgcggagcacaagcatggctga
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