Streptomyces sp. CdTB01: AS200_06555
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Entry
AS200_06555 CDS
T04240
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
scx
Streptomyces sp. CdTB01
Brite
KEGG Orthology (KO) [BR:
scx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scx03032
]
AS200_06555
03400 DNA repair and recombination proteins [BR:
scx03400
]
AS200_06555
Enzymes [BR:
scx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AS200_06555
DNA replication proteins [BR:
scx03032
]
Prokaryotic type
DNA Topoisomerases
AS200_06555
DNA repair and recombination proteins [BR:
scx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AS200_06555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
SfLAP
Motif
Other DBs
NCBI-ProteinID:
ALV31736
UniProt:
A0A0U3NG04
LinkDB
All DBs
Position
complement(1517386..1518402)
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AA seq
338 aa
AA seq
DB search
MRLRTSSCERPGFSRVRCGRGFRYRDQDGRPLTDSAHLARIRALVIPPAWRDVWICPWPN
GHLQAVGTDDAGRRQYLYHELFRAQQEQAKHAHVRQVARALPELRAKVALDLAGSGLSRA
RVTACAVRLLDLGFFRIGSDRHTRTSETYGLTTMLREHVTCRSGELAFGFPAKGGTKIVR
ALVDDQAHTVVRALLRRRRGGERLLVYWEGGAWHDLHGADLNEAMRRLSGTEITAKDFRT
WHATVLAAVALAVGTQEARATPTARRRQVARAVREVSHYLGNTPAVCRASYIDPRVIELF
DEGRTVAPALTRLGEHGDFGRPATQGAVEAAVLELLQA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagactgcgcaccagctcctgcgaacggcccgggttcagccgcgtgcgctgcggccgc
ggcttccgctaccgggaccaggacgggcggcccctgacggactccgcccatctcgcccgc
atccgtgccctggtcatcccgcccgcctggcgggacgtgtggatctgcccctggcccaac
gggcatctgcaggccgtcggcaccgacgacgccggccgccgccagtacctctaccacgag
ctgttccgcgcccagcaggagcaggccaagcacgcccacgtccgccaggtcgcccgggcc
ctgcccgagctgcgtgccaaggtcgccctcgacctcgccggcagcggactgtccagagcg
cgcgtcacggcctgcgccgtgcgcctgctggacctcggcttcttccgcatcggcagcgac
cggcacacccgcaccagcgagacctacggcctgacgaccatgctgcgcgagcacgtgacc
tgccgcagcggcgagctcgccttcggcttcccggccaagggcggtacgaagatcgtccgg
gccctcgtcgacgaccaggcccacaccgtcgtacgggctctgctgcggcgtcggcgcggt
ggggaacggctgctggtgtactgggagggcggagcctggcacgacctgcacggcgcggac
ctgaacgaggcgatgcgccggctgtcggggacggagatcaccgccaaggacttccggacc
tggcacgccacggtgctggccgccgtcgcgctcgccgtggggacgcaggaggcccgcgcc
acccccaccgcccggcgccggcaggtcgcccgcgccgtccgcgaggtcagccactactta
ggcaacacgccggcggtgtgccgggcctcctacatcgacccgcgggtcatcgagctgttc
gacgaggggcgcaccgtcgcccccgcgctcacccggctgggcgagcacggggacttcggg
cgtcccgccacgcagggcgccgtcgaggccgctgtgctggaacttctccaggcgtga
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