Streptomyces sp. CdTB01: AS200_10585
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Entry
AS200_10585 CDS
T04240
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
scx
Streptomyces sp. CdTB01
Brite
KEGG Orthology (KO) [BR:
scx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scx03021
]
AS200_10585
Transcription machinery [BR:
scx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AS200_10585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_24
MarR_2
HTH_28
MarR
GerE
HTH_3
HTH_31
HTH_10
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ALV32438
UniProt:
A0A0U3PFL8
LinkDB
All DBs
Position
complement(2405407..2406201)
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AA seq
264 aa
AA seq
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MPTRVSTKHHPHDDAPDTADAFRRLATLPPGPQRDALRERVVEAWLPMAERLAGRFRNRG
ESNEDLRQVAALGLVKAVDRYDPELGNAFESYAVPTITGEIKRHFRDHMWTLHVPRRVQE
LRNRVRFAAQDLTQTVSGRRPTVAEIAEHADMSEEDVLAGMEALESFSALSLDAELPGSE
DGYSLGDALGSPDPALDKVVDREAVAPRLAALPERERAILYMRFFGDMTQSRIAEQLGIS
QMHVSRLISRCCSRVREQVLNEAA
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcccactcgagtgagcacgaagcaccacccgcacgacgacgcccccgacaccgccgac
gccttccgccggctcgcgacgctgcccccgggcccgcagcgcgacgcactgcgcgaacgg
gtcgtagaggcctggctgcccatggccgaacggctcgccggccggttccgcaaccgcggc
gagagcaacgaggacctgcgccaggtcgcggccctcggcctggtcaaggccgtcgaccgg
tacgaccccgaactcggcaacgccttcgagagctacgccgtgcccaccatcaccggtgag
atcaagcggcacttccgcgaccacatgtggaccctgcacgtcccgcgccgggtccaggaa
ctgcgcaaccgggtgcggttcgccgcgcaggacctcacccagaccgtctcgggccgcagg
cccaccgtcgccgagatcgccgagcacgcggacatgagcgaggaggacgtgctggccggc
atggaggccctggagagcttctccgccctctccctcgacgccgagcttcccggcagcgag
gacggctactccctcggcgacgccctcggctcgcccgaccccgccctcgacaaggtggtg
gaccgcgaggcggtcgcgccccggctggcggcgctgcccgaacgcgagcgggccatcctg
tacatgcgcttcttcggcgacatgacccagagccggatcgccgagcagctgggcatctcg
cagatgcacgtctcccggctgatcagccgctgctgcagccgtgtgcgcgaacaggtgctc
aacgaggcggcgtag
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