Streptomyces sp. CdTB01: AS200_11570
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Entry
AS200_11570 CDS
T04240
Name
(GenBank) AraC family transcriptional regulator
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
scx
Streptomyces sp. CdTB01
Pathway
scx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AS200_11570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scx03000
]
AS200_11570
03400 DNA repair and recombination proteins [BR:
scx03400
]
AS200_11570
Enzymes [BR:
scx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
AS200_11570
Transcription factors [BR:
scx03000
]
Prokaryotic type
Helix-turn-helix
AraC family
AS200_11570
DNA repair and recombination proteins [BR:
scx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AS200_11570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
DUF6233
Motif
Other DBs
NCBI-ProteinID:
ALV32616
UniProt:
A0A0U3NIK1
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All DBs
Position
complement(2627253..2628638)
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AA seq
461 aa
AA seq
DB search
MMDEDTRYEAVRSRDARFDGEFFFAVETTGIYCRPSCPAVTPKRRNVRFYATAAAAQGAG
FRACRRCRPDAVPGSADWNARADVVGRAMRLIADGVVDREGVAGLAGRLGYSARQVQRQL
TAELGAGPVALARAQRAHTARVLVQTTDLPITEIAFASGFASVRQFNDTVREVYASTPSE
LRAAAPRQRGRRPAAGIPLRLAHRGPYQTGAVFELLAEEAVPGVEEVSGERGRRTYRRTL
RLPHGTGVVAVDERPGRSGSASAAHPGGWLEARLQLTDPRDLTTAVGRLRRLFDLDSDPY
AIDERLGADPRLAPLVAARPGLRSPGAADADEAAVRALVGPRTSERLVRRYGKALDAPTG
TLTHLFPEPAVLAEAEPDGTLGALTAALADGALRLDPGADRDEAHAALLALPGMDPAAVA
AIRTRALGDPDVAPPGPDVPDTWRPWRSYALRHLRAAGELD
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtgatggacgaggacaccaggtacgaggccgtgcggagccgtgacgcgcgattcgacggc
gagttcttcttcgccgtcgagacgaccggcatctactgccggcccagctgcccggccgtg
accccgaagcgccgcaacgtccgcttctacgccacggccgccgcggctcagggcgccggc
ttccgggcctgccgccgctgccgcccggacgccgtgccgggatccgccgactggaacgcc
cgcgccgacgtggtgggccgcgcgatgcggctgatcgcggacggcgtcgtcgaccgcgag
ggcgtcgccgggctcgccgggcggctcggctacagcgcccgccaggtgcagcggcagctg
accgccgagctcggcgccggacccgtcgccctggcccgggcccagcgggcgcacaccgcg
cgggtgctggtgcagacgaccgacctgccgatcacggagatcgcgttcgcgtcgggattc
gccagcgtccggcagttcaacgacaccgtccgcgaggtctacgcctccacaccgagcgag
ctgcgggccgcggcgccccggcagcggggccgccgccccgccgcgggtatcccgctgcgg
ctcgcccaccgcggcccgtaccagaccggcgccgtcttcgaactgctcgccgaggaagcc
gttcccggcgtggaggaggtgagcggggagcgcggccgccgcacctaccggcgcaccctc
cgcctcccgcacggcacgggcgtcgtcgccgtcgacgaacggccgggcaggtccgggtcc
gcgtccgccgcgcaccccggcggctggctggaggcccgcctgcagctgaccgacccccgc
gacctcaccaccgccgtcggccggctgcgcaggctgttcgacctcgactccgacccgtac
gcgatcgacgagcggctcggcgccgacccacggctcgcccccctcgtcgccgcccgccca
ggtctgcgctcgccgggcgccgccgacgcggacgaggcggccgtacgggccctggtgggg
ccgcgcaccagcgaacggctggtacggcggtacggcaaggccctcgacgcgcccaccggc
accctcacccacctcttccccgaaccggccgtcctcgccgaggccgaacccgacggcacc
ctcggcgccctcaccgccgccctcgccgacggcgccctgcgtctcgatccgggcgccgac
cgcgacgaggcgcacgccgccctgctcgccctgcccggcatggaccccgccgccgtcgcc
gcgatccgtacccgggccctcggcgaccccgacgtcgccccgcccggcccggacgtgccc
gacacctggcgcccctggcgctcgtacgccctacgacacctgcgcgcagcaggagagttg
gactga
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