Streptomyces sp. CdTB01: AS200_11855
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Entry
AS200_11855 CDS
T04240
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
scx
Streptomyces sp. CdTB01
Pathway
scx03030
DNA replication
scx03430
Mismatch repair
scx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AS200_11855
03430 Mismatch repair
AS200_11855
03440 Homologous recombination
AS200_11855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scx03032
]
AS200_11855
03400 DNA repair and recombination proteins [BR:
scx03400
]
AS200_11855
Enzymes [BR:
scx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AS200_11855
DNA replication proteins [BR:
scx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AS200_11855
DNA repair and recombination proteins [BR:
scx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AS200_11855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ALV32668
LinkDB
All DBs
Position
complement(2692380..2693102)
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AA seq
240 aa
AA seq
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MAWHRELLIGFDLETTGTDPREARIVTGAVIEVRGGQPIGRREWLADPGVEIPADAVAVH
GISNERATAEGRPADQVADAIADVLASYWKAGVPVVAYNAAFDLSLLSAELRRHALPSLS
DRLGGLDPAPVIDPYTIDRWVDRYRRGKRNLEAVCTEYGVPLEAAHDASADALAAAGLAC
AIADRHPKIAALGPAELHRRQIEWYAQWAADFQSFLRRKGDATAVVDGTWPLRELTDEPV
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggcctggcaccgggagctgctgatcggcttcgacctggagacgaccggcacggatccg
cgcgaggcgcgcatcgtcacgggggccgtgatcgaggtcaggggcggacagccgataggg
cgccgggaatggctcgccgatccgggcgtggagatcccggctgacgcggtggccgtgcac
gggatcagcaacgagcgggcgaccgccgagggccggcccgccgaccaggtggccgacgcc
atcgcggacgtgctcgcctcgtactggaaggcgggagtcccggtcgtcgcctacaacgcg
gccttcgacctcagcctgctctccgccgagctgcgccgccacgcactgccctccctgagc
gaccgcctcggcggcctcgaccccgcaccggtcatcgacccgtacaccatcgaccggtgg
gtcgaccggtaccgccgcggcaagcgcaacctcgaagcggtctgcacggagtacggtgtc
cccctggaggccgcccacgacgcctcggccgacgccctcgccgcggccggcctggcctgt
gcgatagccgaccgccaccccaagatcgcggccctcggcccggcggaactgcaccgccgc
cagatcgagtggtacgcgcagtgggcggcggacttccagagcttcctgcgccgcaagggc
gacgcgacggcggtggtcgacggcacctggccgctgcgggaactgacggacgagccggtc
tga
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