KEGG   Streptomyces sp. CdTB01: AS200_12320
Entry
AS200_12320       CDS       T04240                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
scx  Streptomyces sp. CdTB01
Brite
KEGG Orthology (KO) [BR:scx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:scx03016]
    AS200_12320
Enzymes [BR:scx01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     AS200_12320
Transfer RNA biogenesis [BR:scx03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    AS200_12320
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC
Other DBs
NCBI-ProteinID: ALV38515
UniProt: A0A0U3QBH4
LinkDB
Position
2796001..2797194
AA seq 397 aa
MLEPREGIPPVVADADALARVIAAFAGGTGPVAVDAERASGYRYGQRAYLVQLRREGAGT
ALIDPVACPDLSGLGEALSDVEWVLHAATQDLPCLREIGMMPTRLFDTELAGRLAGFPRV
GLGAMVEGVLGFVLEKGHSAVDWSTRPLPEPWLRYAALDVELLVDLRDALEKELDRQGKL
DWARQEFAAIAAAPPAEPRKDPWRRTSGMHKVRRRRQLAVVREMWQTRDRIAQRRDVSPG
KVLSDAAIVEAALALPADVQALTALNGFGNRMGRRQLEQWQAAVDRAKTLSESQLPAPGQ
PVTGPPPPRAWADKDPAAAARLSAARAGVSALAERLNMPQENLISPDTVRRVCWEPPRVA
DAESVGAALAGHGARAWQVEQVTPVLVAALSASAQAT
NT seq 1194 nt   +upstreamnt  +downstreamnt
ctgctggagccgcgcgagggcattccgcccgtcgtcgccgacgcggacgcgctcgcccgg
gtgatcgccgcgttcgcgggcggcaccgggcccgtcgccgtcgacgccgagcgcgcttcc
ggctaccgctacggccagcgcgcctatctggtgcagctgcgccgggagggcgcggggacc
gccctgatcgatcccgtggcctgtcccgacctgtccggcctcggcgaagccctgtcggac
gtcgagtgggtgctgcacgccgccacccaggacctgccctgtctgcgcgagataggcatg
atgccgacgcggctgttcgacaccgagctcgcgggacggctggcaggcttcccccgggtc
ggcctcggcgcgatggtcgagggcgtcctgggcttcgtcctggagaaggggcactccgcc
gtcgactggtcgacccggccgctgcccgagccgtggctccggtacgcggcactggacgtg
gagctgctggtcgatctgcgggacgccctggagaaggagctggaccggcaggggaagctg
gactgggcccggcaggagttcgcggcgatcgcggccgcgccgcccgccgagccgcgcaag
gacccctggcgccgcacctccgggatgcacaaggtgcgccggcgccggcagctcgccgtc
gtccgggagatgtggcagacccgcgaccggatcgcccagcgccgggacgtctcgccgggc
aaggtgctcagcgacgcggccatcgtggaggccgcgctcgccctgccggccgacgtacag
gcgctcacggcgctgaacggcttcggcaatcgcatggggcggcggcagctggagcagtgg
caggcggccgtggaccgggcgaagacgctgtccgaatcccagctgcccgcacccgggcag
ccggtgaccgggcctccgccgccgcgggcctgggccgacaaggacccggccgcggccgcg
cggctgtcggcggcgcgggccggggtgtcggcgctggccgagcggctgaacatgccccag
gagaacctgatctcgccggacaccgtgcggcgggtgtgctgggagccgccgagggtcgcg
gacgccgagtcggtcggggccgcgctggccgggcacggggcgcgggcctggcaggtcgag
caggtcacgccggtgctggtggccgcgctgtccgcgagcgcccaggccacctga

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