Streptomyces sp. CdTB01: AS200_12320
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Entry
AS200_12320 CDS
T04240
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
scx
Streptomyces sp. CdTB01
Brite
KEGG Orthology (KO) [BR:
scx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scx03016
]
AS200_12320
Enzymes [BR:
scx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AS200_12320
Transfer RNA biogenesis [BR:
scx03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AS200_12320
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Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
ALV38515
UniProt:
A0A0U3QBH4
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Position
2796001..2797194
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AA seq
397 aa
AA seq
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MLEPREGIPPVVADADALARVIAAFAGGTGPVAVDAERASGYRYGQRAYLVQLRREGAGT
ALIDPVACPDLSGLGEALSDVEWVLHAATQDLPCLREIGMMPTRLFDTELAGRLAGFPRV
GLGAMVEGVLGFVLEKGHSAVDWSTRPLPEPWLRYAALDVELLVDLRDALEKELDRQGKL
DWARQEFAAIAAAPPAEPRKDPWRRTSGMHKVRRRRQLAVVREMWQTRDRIAQRRDVSPG
KVLSDAAIVEAALALPADVQALTALNGFGNRMGRRQLEQWQAAVDRAKTLSESQLPAPGQ
PVTGPPPPRAWADKDPAAAARLSAARAGVSALAERLNMPQENLISPDTVRRVCWEPPRVA
DAESVGAALAGHGARAWQVEQVTPVLVAALSASAQAT
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
ctgctggagccgcgcgagggcattccgcccgtcgtcgccgacgcggacgcgctcgcccgg
gtgatcgccgcgttcgcgggcggcaccgggcccgtcgccgtcgacgccgagcgcgcttcc
ggctaccgctacggccagcgcgcctatctggtgcagctgcgccgggagggcgcggggacc
gccctgatcgatcccgtggcctgtcccgacctgtccggcctcggcgaagccctgtcggac
gtcgagtgggtgctgcacgccgccacccaggacctgccctgtctgcgcgagataggcatg
atgccgacgcggctgttcgacaccgagctcgcgggacggctggcaggcttcccccgggtc
ggcctcggcgcgatggtcgagggcgtcctgggcttcgtcctggagaaggggcactccgcc
gtcgactggtcgacccggccgctgcccgagccgtggctccggtacgcggcactggacgtg
gagctgctggtcgatctgcgggacgccctggagaaggagctggaccggcaggggaagctg
gactgggcccggcaggagttcgcggcgatcgcggccgcgccgcccgccgagccgcgcaag
gacccctggcgccgcacctccgggatgcacaaggtgcgccggcgccggcagctcgccgtc
gtccgggagatgtggcagacccgcgaccggatcgcccagcgccgggacgtctcgccgggc
aaggtgctcagcgacgcggccatcgtggaggccgcgctcgccctgccggccgacgtacag
gcgctcacggcgctgaacggcttcggcaatcgcatggggcggcggcagctggagcagtgg
caggcggccgtggaccgggcgaagacgctgtccgaatcccagctgcccgcacccgggcag
ccggtgaccgggcctccgccgccgcgggcctgggccgacaaggacccggccgcggccgcg
cggctgtcggcggcgcgggccggggtgtcggcgctggccgagcggctgaacatgccccag
gagaacctgatctcgccggacaccgtgcggcgggtgtgctgggagccgccgagggtcgcg
gacgccgagtcggtcggggccgcgctggccgggcacggggcgcgggcctggcaggtcgag
caggtcacgccggtgctggtggccgcgctgtccgcgagcgcccaggccacctga
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