Streptomyces sp. CdTB01: AS200_12930
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Entry
AS200_12930 CDS
T04240
Name
(GenBank) DNA topoisomerase IV subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
scx
Streptomyces sp. CdTB01
Brite
KEGG Orthology (KO) [BR:
scx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scx03032
]
AS200_12930
03400 DNA repair and recombination proteins [BR:
scx03400
]
AS200_12930
Enzymes [BR:
scx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AS200_12930
DNA replication proteins [BR:
scx03032
]
Prokaryotic type
DNA Topoisomerases
AS200_12930
DNA repair and recombination proteins [BR:
scx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AS200_12930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
ALV32855
UniProt:
A0A0U3N8L8
LinkDB
All DBs
Position
complement(2948356..2950479)
Genome browser
AA seq
707 aa
AA seq
DB search
MTAETSVSSTALLAGAERDGSNYTARHLLVLEGLEAVRKRPGMYIGSTDSRGLMHCLWEI
IDNSVDEALGGYCDHIEVILHDDGSVEVRDNGRGIPVDVEPKTGLSGVEVVMTKLHAGGK
FGGGSYAASGGLHGVGASVVNALSARLDVEVDRGGHTHAISFRRGVPGAFAGNGPDAKFE
AASGLRKAKKIPKTRSGTRVRYWADRQIFLKDAKLSLVNLHQRARQTAFLVPGLTIVVRD
EFGLGEGGSKGEESFRFDGGISEFCEYLASDRPVCDVLRLSGQGTFRETVPVLDEHGQMT
PTQVTRELDVDVAMRWGTGYDTTLKSFVNIIATPKGGTHVAGFETAVTSTLNEVLRAKKL
LRVAEDDIVKDDALEGLTAVVTVRLAEPQFEGQTKEVLGTSAARRIVNNVINKELKAFLT
STKRDAAAQARVVMEKAVAAARTRIAARQHKDAQRRKTALESSSLPAKLADCRSDDVDRS
ELFIVEGDSALGTAKLARNSEFQALLPIRGKILNVQKSSVTDMLKNAECGAIIQVIGAGS
GRTFDIDAARYGKIIMMTDADVDGSHIRTLLLTLFHRYMRPMVEAGRVFAAVPPLHRIEL
VQPKKGQDKYVYTYSDRELRDKLLEFESKGVRYKDSIQRYKGLGEMDADQLAETTMDPRH
RTLRRINLSDLDAAETVFDLLMGNDVAPRKEFISSSAATLDRSRIDA
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccgaaacgtccgtgtcgtccacagcgctgctggcaggagcagagcgggacggt
tccaactacaccgcgcggcacctgctcgtcctcgaggggctcgaggccgtgcgcaagcgt
cccggtatgtacatcggatcgaccgacagccgtggtctgatgcactgcctctgggagatc
atcgacaactcagtcgacgaggccctcgggggctactgcgaccacatcgaggtgatcctc
cacgacgacggctcggtggaggtccgggacaacggccggggcatcccggtcgacgttgag
cccaagacgggcctgtccggcgtcgaggtcgtcatgaccaagctgcacgccggcggcaag
ttcggcggcggctcgtacgccgcctccggcggtctgcacggcgtgggtgcctccgtggtc
aacgcgctgtcggcccgcctggacgtcgaggtcgaccgcggcggtcacacgcacgcgatc
agcttccgccgcggtgtgcccggcgccttcgcgggcaacggcccggacgccaagttcgag
gccgccagcggcctgcgcaaggccaagaagatccccaagacccgcagcggcacgcgcgtg
cgctactgggccgaccgccagatcttcctcaaggacgccaagctctccctggtcaacctc
caccagcgggcccgccagacggcgttcctggtgccgggcctcaccatcgtcgtccgtgac
gagttcggtctcggcgagggtggcagcaagggcgaggagtccttccgtttcgacggcggc
atcagcgagttctgcgagtacctggcgagcgacaggccggtctgtgacgtcctccgcctc
tccggccagggcaccttcagggagacggttccggtcctggacgagcacggccagatgacc
cccacccaggtcacccgcgagctcgacgtcgacgtcgccatgcgctggggcacgggctac
gacacgaccctgaagtcgttcgtgaacatcatcgccacccccaagggcggcactcacgtc
gcgggcttcgagacggccgtcaccagcaccctcaacgaggtcctgcgcgccaagaagctg
ctgcgcgtggccgaggacgacatcgtcaaggacgacgccctggaggggctgacggccgtc
gtcaccgtgcggctcgccgaacctcagttcgagggtcagaccaaggaggtcctcggcacc
tcggcggcccgccggatcgtgaacaacgtgatcaacaaggaactcaaggcgttcctgacc
tccaccaagcgtgacgccgcggcccaggcccgcgtcgtcatggagaaggccgtcgcagcg
gcccgtacgcgcatcgccgcccgtcaacacaaggacgcccagcgccgcaagacggccctg
gagtcctcctcgctgccggcgaaactcgccgactgccgcagcgacgacgtggaccgcagc
gagctcttcatcgtcgagggcgactcggccctcggcaccgccaagctcgcccgcaactcc
gagttccaggcgctgctgccgatccgcggcaagatcctgaacgtccagaagtcgtccgtg
accgacatgctcaagaacgccgagtgcggcgcgatcatccaggtcataggggccggctcc
ggtcgtacgttcgacatcgacgcggcccgctacggcaagatcatcatgatgaccgacgcc
gacgtcgacggctcgcacatccgcacgctgcttctgaccctcttccaccgctacatgcgg
cccatggtcgaggccggccgggtgttcgccgcggtgccgccgctgcaccgcatcgagctg
gtccagccgaagaagggccaggacaagtacgtctacacctactcggaccgggagcttcgc
gacaagctgctcgaattcgagagcaagggtgtccggtacaaggactccatccagcgctac
aagggcctcggtgagatggacgccgaccagctggccgagacgaccatggacccccgccac
cgcaccctgcgccggatcaacctctccgacctggacgcggccgagacggtcttcgacctg
ctgatgggcaacgacgtggcgccgcgcaaggagttcatctccagctccgcggcgacgctg
gaccgctcgcgcatcgacgcgtag
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