Streptomyces sp. CdTB01: AS200_13115
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Entry
AS200_13115 CDS
T04240
Name
(GenBank) tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
scx
Streptomyces sp. CdTB01
Brite
KEGG Orthology (KO) [BR:
scx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scx03016
]
AS200_13115
Enzymes [BR:
scx01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
AS200_13115
Transfer RNA biogenesis [BR:
scx03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
AS200_13115
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
ALV32885
UniProt:
A0A0U3PMF7
LinkDB
All DBs
Position
complement(2998484..2999983)
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AA seq
499 aa
AA seq
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MDVQSPKTYEVRTYGCQMNVHDSERLSGLLEDAGYVRAPEGSDGDADVVVFNTCAVRENA
DNRLYGNLGRLAPRKASRPGMQIAVGGCLAQKDRDTIVKKAPWVDVVFGTHNIGKLPVLL
ERARVQEEAQVEIAESLEAFPSTLPTRRESAYAAWVSISVGCNNTCTFCIVPALRGKEKD
RRTGDILAEIEALVGEGVSEITLLGQNVNAYGSDIGDREAFSKLLRACGTIEGLERVRFT
SPHPRDFTDDVIAAMAETPNVMPQLHMPLQSGSDTVLKAMRRSYRQERYLGIIEKVRAAM
PDAAISTDIIVGFPGETDEDFEQTMHVVREARFTNAFTFQYSKRPGTPAATMEDQIPKEV
VQARYERLVALQEEISWEENKKQVGRTLELMVAEGEGRKDGTTHRLSGRAPDNRLVHFTK
PDQDVRPGDVVTVEITYAAPHHLLAEGAVLDVRRTRAGDAWEKRNAAEAAKPAGVMLGLP
RIGAPEPLPVASGSGCGCD
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
gtggacgttcagtcacccaagacctacgaagtgcgcacctacgggtgtcagatgaacgtc
cacgactccgagcggttgtccgggctgctggaggacgccggctacgtgcgcgcccccgag
gggtccgacggcgacgccgacgtcgtcgtcttcaacacctgcgcggtccgggagaacgcc
gacaaccgcctgtacggcaacctcggccgcctcgcgcccaggaaggcgtcccgtcccggc
atgcagatcgcggtcggcggctgtctggcgcagaaggaccgggacaccatcgtgaagaag
gcgccctgggtggacgtcgtcttcggcacgcacaacatcggcaagctcccggtgctgctg
gaacgcgcgcgcgtgcaggaagaggcgcaggtcgagatcgccgagtcgctggaggcgttc
ccctccaccctgccgacgcgccgcgagagcgcgtacgcggcgtgggtgtcgatctccgtc
ggctgcaacaacacctgcaccttctgcatcgtcccggccctgcgcggcaaggagaaggac
cgccgcaccggcgacatcctggccgagatcgaggccctggtcggcgagggcgtctccgag
atcaccctgctcgggcagaacgtcaacgcctacggctccgacatcggcgaccgcgaggcg
ttcagcaagctgctgcgggcctgcgggacgatcgagggcctggagcgcgtccgcttcacc
tccccgcacccgcgcgacttcacggacgacgtcatcgccgccatggccgagacgccgaac
gtcatgccgcagctgcacatgcccctgcagtccggctcggacacggtcctgaaggcgatg
cgccgctcgtaccggcaggagcgctacctcggcatcatcgagaaggtccgcgccgccatg
ccggacgccgcgatctcgacggacatcatcgtgggcttccccggcgagaccgacgaggac
ttcgagcagaccatgcacgtggtccgcgaggcccgcttcacgaacgccttcaccttccag
tactccaagcgccccggcaccccggccgccaccatggaggaccagatccccaaggaagtc
gtccaggcgcgctacgagcgtctcgtcgccctccaggaggagatctcctgggaggagaac
aagaagcaggtcggccgcaccctggagctgatggtcgccgagggcgagggtcgcaaggac
ggcaccacccaccgtctctccggccgcgcccccgacaaccgcctggtccacttcaccaag
cccgaccaggacgtccgccccggcgacgtcgtcaccgtcgagatcacctacgccgccccg
caccacctcctcgccgagggtgccgtcctcgacgtgcgccgcacgcgcgcgggtgacgcg
tgggagaagcgcaacgccgccgaggccgccaagcccgccggcgtcatgctgggcctgccg
aggatcggcgcgcccgagccgctgccggtggcgtcggggagcggctgcggctgcgactga
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