Streptomyces sp. CdTB01: AS200_13225 Help Entry AS200_13225       CDS       T04240                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism scx  Streptomyces sp. CdTB01 Brite KEGG Orthology (KO) [BR:scx00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:scx03400]     AS200_13225 Enzymes [BR:scx01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      AS200_13225     5.6.2.6  RNA 3'-5' helicase      AS200_13225 DNA repair and recombination proteins [BR:scx03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     AS200_13225 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WH_Lhr DEAD WH3_Lhr WH4_Lhr WH2_Lhr Helicase_C ResIII AlkZ-like DUF6406 AAA_25 PhoH Motif Other DBs NCBI-ProteinID:  ALV32906 UniProt:  A0A0U2WKX4 LinkDB All DBs Position 3021253..3026130 Genome browser AA seq 1625 aa AA seqDB search MVSDAQRALDGFSPATRGWFTGAFSAPTAAQAGAWNAIREGSDVLVVAPTGSGKTLAAFL AALDQLASTPPPADPRKRCRVLYVSPLKALAVDVERNLRSPLTGIRHESVRLGLPEPEVK VGIRSGDTPPAERRALATRPPDILITTPESLFLMLTSSTRDALTGVETVILDEVHAVAGT KRGAHLALSLERLDELLPRPARRIGLSATVRPVDEVARYLSPRRKVEIVQPKSGKEFDLS VVVPVEDLGELGGSPVADGSDKAERPSIWPHVEERITDLVQAHRSTIVFANSRRLAERLC NRLNEIAYERATGEPLDEHHAPAELMGGSGAAQGAPPVIARAHHGSVSKEQRALVEEDLK AGRLPAVVATSSLELGIDMGAVDLVVQVESPPSVASGLQRVGRAGHQVGAVSTGVVFPKY RGDLVQAAVVTERMRTGSIESLRVPANPLDVLAQQLVAMTALDTWQVDDLLATVRRAAPF ASLPESAFTAVLDMLAGRYPSDAFAELRPRVVWDRVAGTITGRPGAQRLAVTSGGTIPDR GLFGVFLAGSDPKKGGGRVGELDEEMVYESRVGDVFTLGTSSWRIEDITRDRVLVSPAPG VPGRLPFWKGDQLGRPLELGRALGQFLREVGSLPKDDARLRLLTAGLDAWAADNVLSYLD EQREACGHIPDDRTIVVERFRDELGDWRVVVHSPFGAQVHAPWALALGAKLSERYGMDAQ VMHADDGIVLRLPDADLMGLDLLDREPTKAGTEYDADQAPVGAADVVFDKGEVDQIVTDQ VGGSALFASRFRECAARALLLPRRNPGKRTPLWQQRQRAAQLLEVASEFGSFPIVLEAVR ECLQDVFDVPGLVELMGDLEARKVRLVEVTTPEPSPFARSLLFGYVAQFLYEGDSPLAER RAAALSLDSRLLAELLGQAELRELLDAEVLTELERELQWLTEDRRVKDAEGIADILRILG PLTDAELAERGAEPHWVQELASARRAIRVRVGGTEHWAAIEDAGRLRDALGTALPVGVPE AFMEPVKDPLGDLLARYARTHGPFTSATAAARFGLGVAVTEGALQRLAANGRVVQGEFHP AGIGQEWCDASVLRRLRRRSLAALRHELEPVPPAALAQFLPQWQHIGKGHALRGIDGLVR AIEQLQGASVPASALEKLVLPSRVAGYTPAMLDELTAAGEIVWAGAGALPGKDGWVSLYT TDAAPLLLPPPHPLELTALHQSVLDALSGGYGLFFRQIADQVRATTHPEATDPQLADAVW DLAWSGRLTNDTLTPMRSLLGSGRTAGSTAHRAKRTVPRGRYGSLTAAARTASRTGPPTV AGRWSLLPSQEPDPTVRAHALARTLLDRHGVVTRGAVAAEGVEGGFSATYRILSVFEESG QARRGYVVEGLGAAQFAMDGAVDRLRAVSNARDRGEALPHPPMDDMTWPPVSSEITGFTE DPDGFPPTPPSRDEYVSPRDFADPGAGGPRGGGSGYVPYASYGSPAPNRRPRPAPDSRAV VLAAADPANAYGAALPWPEPPTGAGHKPGRKAGSLVVLVDGELTLYMERGGKTLLAWPAD LDGKATDDPRLQPAAEALANAARAGSLGTVTVERINNAQALTSPIGTLLEGAGFIATPRG LRLRA NT seq 4878 nt NT seq  +upstreamnt  +downstreamnt atggtcagcgacgcacaacgggccctcgacggcttctcccccgcgacccgcggctggttc acgggggccttctccgcgcccaccgcggcccaggcgggcgcgtggaacgccatcagagag ggctcggacgtgctggtggtcgcccccaccggctcgggcaagaccctggccgccttcctc gccgccctggaccagctcgcctccacacccccgcccgccgacccgaggaagcgctgccgg gtcctgtatgtgtcgccgctgaaggccctcgcggtggacgtggagcgcaacctccgcagc cccctcaccggcatccgccacgagtccgtccggctcggcctgcccgagcccgaggtgaag gtgggcatccgctccggcgacacccctcccgccgagcgccgcgccctggccacccgtccc ccggacatcctgatcaccacgcccgagtccctcttcctgatgctgacgtcgtcgacccgc gacgcgctgaccggcgtggagacggtgatcctcgacgaggtgcacgcggtggccggcacc aagcgcggcgcccatctcgcgctctccctggagcgcctggacgagctgctgcccaggccg gcccgccgcatcggcctgtcggcgaccgtccgcccggtggacgaggtggcccgctacctc tccccgcgccgcaaggtcgagatcgtccagcccaagtcgggcaaggagttcgacctctcc gtcgtcgtccccgtggaggacctgggcgagctgggcggctcaccggtcgccgacggctcg gacaaggcggagcgtccctccatctggccccatgtcgaggagcggatcaccgacctcgtc caggcccaccgctccacgatcgtcttcgccaactcccgccgcctcgcggagcgcctgtgc aaccggctcaacgagatcgcgtacgagcgtgccaccggcgaacccctggacgagcaccac gccccggccgagctcatgggcggttcgggagccgcccagggcgccccgccggtcatcgcc cgcgctcaccacggctcggtctccaaggagcagcgggccctggtcgaggaggacctcaag gcgggccgcctgcccgcggtggtggcgacgtccagcctggaactgggcatcgacatgggc gccgtcgacctggtcgtccaggtcgagtcgcccccttcggtcgcctccggcttgcagcgc gtgggccgtgcgggccaccaggtcggcgcggtcagcaccggcgtggtcttccccaagtac cgcggtgacctggtccaggcggcggtggtcaccgagcgcatgcgcaccggctccatcgag tccctgcgggtccccgccaacccgctggacgtcctcgcccagcagctggtcgccatgacg gccctggacacctggcaggtcgacgacctgctggccacggttcgccgcgcggcccccttc gcgtccctgcccgagtcggcgttcacggcggtcctggacatgctcgcgggccgctacccg tccgacgcgttcgccgagctgcgcccgcgcgtggtgtgggaccgcgtcgcgggcaccatc accggccgtccgggcgcccagcgcctcgccgtgacctcgggcggcaccatccccgaccgc ggtctcttcggggtcttcctcgccgggtccgaccccaagaagggcggcggccgggtcggt gagctcgacgaggagatggtctacgagtcccgggtcggcgacgtgttcacgctcggcacc agctcctggcggatcgaggacatcacccgcgaccgcgtgctggtctcccccgcgccgggc gtcccgggccggctgcccttctggaagggcgaccagctcggccgcccgctcgaactgggc cgcgcgctgggccagttcctgcgcgaggtcggctccctgcccaaggacgacgcccggctg cgcctgctcacggcggggctggacgcctgggcggcggacaacgtcctgtcctacctggac gagcagcgcgaggcgtgcggccacatccccgacgaccgcacgatcgtggtcgagcgcttc cgggacgaactgggcgactggcgcgtggtcgtccactccccgttcggcgcccaggtgcac gccccgtgggcgctcgccctgggcgccaagctctccgagcgctacggcatggacgcgcag gtcatgcacgccgacgacggcatcgtcctgcgtctgcccgacgccgacctcatgggcctg gacctgctcgaccgggaaccgacgaaggcgggcaccgagtacgacgccgaccaggccccc gtgggcgcggcggacgtcgtcttcgacaagggcgaggtcgaccagatcgtcaccgaccag gtcggcggatcggccctgttcgcgtcccggttccgcgagtgcgccgcccgcgcgctgctg ctgccgcgccgcaaccccggcaagcgcaccccgctctggcagcagcgccagcgcgccgcg caactgctggaggtggccagcgagttcggctcgttcccgatcgtcctcgaagccgtccgc gagtgcctccaggacgtcttcgacgtgcccggactcgtcgagctgatgggtgacctcgag gcccgcaaggtgcgtctggtggaggtcaccaccccggagccgtcccccttcgcccgttcc ctcctcttcgggtacgtcgcgcagttcctgtacgagggggactctccgctcgccgagcgc cgggccgccgccctctccctggactcgcgtctgctggccgaactgctcggccaggcggag ctgcgcgaactcctcgacgccgaggtgctgaccgagctggagcgcgagctccagtggctc accgaggaccggcgcgtcaaggacgccgagggcatcgccgacatcctgcgcatcctcggc ccgctgaccgacgcggagctggccgagcggggcgcggagccgcactgggtccaggagctg gcctccgcccggcgcgcgatccgcgtccgggtcggcggcaccgagcactgggcggccatc gaggacgccgggcgcctgcgcgacgcactcggcaccgcgctgcccgtcggcgtccccgag gcgttcatggagccggtcaaggaccctctgggcgacctgctggcccgctacgcccgcacc cacggcccgttcacgtcggccaccgcggcggcccgcttcggcctgggcgtggcggtcacg gagggcgcgctgcagcggctcgccgcgaacggccgcgtcgtacagggcgagttccatccg gcgggcatcggccaggagtggtgcgacgcgtccgtgctgcgccgtctgcgccgccgttcc ctggccgcgctgcggcacgaactggagcctgtgcccccggccgcgctcgcccagttcctc ccgcagtggcagcacatcggcaaggggcacgcactgcgcggcatcgacggactcgtccgg gcgatcgagcagttgcagggcgcgtcggtccccgcctccgccctggagaagctggtgctg ccctcccgcgtcgccggctacaccccggcgatgctcgacgagctcaccgccgccggagag atcgtctgggccggcgcgggcgcgctgcccggcaaggacggctgggtctccctctacacg acggacgcggccccgctcctcctgccgccaccgcacccgctggaactgaccgccctgcac cagtccgtgctggacgccctctccgggggttacggcctgttcttccggcagatcgccgac caggtccgcgccaccacccaccccgaggccaccgatccccaactggccgacgccgtctgg gacctggcctggtccgggcgcctgacgaacgacacgctgaccccgatgcgctccctgctg ggttcgggccgcaccgcgggctccacggcccaccgggccaagcgcaccgtcccgcgcggc cgctacggctccctgaccgccgccgcccgcaccgcctcccggacgggcccgcccaccgtc gccggccgctggtcgctgctcccctcccaggagcccgaccccacggtccgcgcccacgcc ctcgcccgcactctcctcgaccggcacggcgtggtcacccggggcgccgtcgccgcggaa ggcgtcgagggcggcttctcggcgacgtaccgcatcctgtccgtgttcgaggagagcggc caggcccggcgcggctatgtggtggagggactcggcgcggcccagttcgcgatggacggc gcggtggaccgcctccgcgcggtgtccaacgcgcgcgaccggggcgaggccctcccgcac ccgcccatggacgacatgacctggccccccgtctcctccgagatcacgggcttcaccgag gacccggacggcttcccgcccaccccgccctcgcgcgacgagtacgtctcgccccgcgac ttcgccgatcccggcgcgggcgggccacgcggcggcggctccggctacgtcccgtacgcc tcgtacggctccccagcccccaaccgccgcccgcgtccggcccccgactcccgggccgtg gtcctggccgccgccgacccggcgaacgcctatggcgcggccctgccctggccggagccc ccgacgggggcgggccacaaaccgggccgcaaggcaggctccctggtggtcctcgtggac ggcgagctgacgctgtacatggagcgcggcggcaagaccctcctcgcctggccggccgac ctcgacggcaaggccacggacgacccccgcctccagcccgccgccgaagccctggccaac gcggcccgggcaggctccctggggaccgtcacggtggagcgcatcaacaacgcccaggcc ctcacctcccccatcggcaccctcctggaaggagcgggcttcatcgcgacccccagaggc ctgcgcctgcgcgcctag

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