Streptomyces sp. CdTB01: AS200_15495
Help
Entry
AS200_15495 CDS
T04240
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
scx
Streptomyces sp. CdTB01
Pathway
scx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AS200_15495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scx03400
]
AS200_15495
Enzymes [BR:
scx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AS200_15495
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AS200_15495
DNA repair and recombination proteins [BR:
scx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AS200_15495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
DUF7573
zf-FPG_IleRS
Auto_anti-p27
Zn_ribbon_recom
DZR
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ALV33276
UniProt:
A0A0U3Q0L6
LinkDB
All DBs
Position
complement(3520254..3521114)
Genome browser
AA seq
286 aa
AA seq
DB search
MPELPEVEVVRRGLERWVAHRVVADAEVLHPRAVRRHIAGADDFAHRLKGHRVGVPSRRG
KYLWLPLEDTHQSVLAHLGMSGQLLVQPESAADEKHLRIRVRFADELRTELRFVDQRTFG
GLSLHDNTPDGLPDVIAHIARDPLDPLFDEDAFHQALRRKRTTIKRALLDQSLISGVGNI
YADEALWRSRVHYERPTAGFTRPRTAELVGHIRDVMNAALAVGGTSFDSLYVNVNGQSGY
FDRSLDAYGREGLPCKRCGTPMRRRPWMNRSSYFCPKCQRAPRVSS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagttgcccgaggtcgaggtcgtccggcggggtctggagcggtgggtcgcccac
cgggtcgtcgccgacgccgaggtgctgcacccgcgcgccgtgcgccggcacatcgccggg
gcggacgacttcgcgcaccgcctcaagggccatcgcgtcggcgtccccagccgccgcggc
aagtacctgtggctgcccctggaggacacccaccagtcggtcctggcccacctcggcatg
agcggccagctgctggtgcagccggagtcggccgcggacgagaagcacctgcgcatccgc
gtccgcttcgccgacgagctgcgcaccgaactccggttcgtcgaccagcgcaccttcggc
gggctgtcgttgcacgacaacacccccgacgggctgcccgacgtcatcgcgcacatcgcg
cgcgaccccctcgacccgctgttcgacgaggacgccttccaccaggccctgcgccgcaag
cgcacgacgatcaaacgggccctgctggaccagtcgttgatcagcggagtcggcaacatc
tacgcggacgaggcgctttggcgctcccgcgtgcactacgaacgcccgacggccggcttc
acccgcccgcgcacggccgaactcgtgggccacatcagggacgtgatgaacgcggccctc
gccgtcggcggcaccagcttcgacagcctctacgtcaacgtcaacgggcagtcgggctac
ttcgaccggtccctcgacgcgtacggccgtgagggcctgccgtgcaagcggtgcggtacg
ccgatgcgccggcggccgtggatgaaccggtcgagctacttctgcccgaagtgtcagagg
gcgccgcgcgtctcgtcgtaa
DBGET
integrated database retrieval system
