Streptomyces sp. CdTB01: AS200_17925
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Entry
AS200_17925 CDS
T04240
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
scx
Streptomyces sp. CdTB01
Pathway
scx03420
Nucleotide excision repair
scx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AS200_17925
03430 Mismatch repair
AS200_17925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scx03400
]
AS200_17925
Enzymes [BR:
scx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AS200_17925
DNA repair and recombination proteins [BR:
scx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AS200_17925
MMR (mismatch excision repair)
Other MMR factors
AS200_17925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ALV38621
UniProt:
A0A0U3QH15
LinkDB
All DBs
Position
complement(4051805..4055374)
Genome browser
AA seq
1189 aa
AA seq
DB search
MPPSISDPDQLKELLGIPFTPEQTACIIAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRKALIKAGVTDPDVIDPDNPPGEPVISTYHAFAGRLL
TDHGLRIGLEPTSRLLADATRFQLAARVLREAPGPYPALTRSFADLVSDLLTLDAELAEH
LVRPEDVRAYDAELLGTLQGAKLTNADLRKVPEAAAARRELADLVVRYRAAKRERDLLDF
GDQIALSAQLARIPEVGRVLREEFRVVLLDEYQDTSVAQRILLAGLFGGGTGHPVTAVGD
PCQAIYGWRGASVANLDDFPEHFARPDGSPATRQALSENRRSGGRLLDLANGLAEPLRAM
HAGVEALRPAPGAERDGVVRCALLPTHAEEIDWIADSIAHLVNTGKAPGEIAVLCRTASD
FAEIQGALVARDVPVEVVGLSGLLHLPEIADLVAVCEVLQDPGANASLVRLLTGPRWRIG
PRDLALLGRRARLLVSHARVEDDDDRDRRLAEAVEGVDPSEVISLADALDTFLEMPLDAE
GEDDGLPFSPDARVRFARLATELRDLRRSLSDPLMDVLHRVLAVTGLEVELSASPHALAA
RRRETLSNFLDVAASFAAGDGEATLLAFLAFLRTAAQYEKGLDNALPGGENTVKVLTAHK
SKGLEWDVVAVPGLVKDTFPSTKGREKWTAQGKVLPHALRGDADTLPDVGSWDSRGLKAF
QEAMKEHQHTEELRLGYVTFTRPRSLLLGSGHWWGPTQKKRRGPSSFLLDLYEHCAAGYG
EIEAWAEEPAEDQENPVLHTASADQVWPLPLDEASLARRRRAAETVLAHLEDLASHEDGH
PAAVHDPDGDEDPDWPVPPDDEEPYEDEEPYDEEPYGDEDPYDGDAPYGEGDPFQDEEPG
DWESWSPDRPAVPHQATGPQSAAHDGTRVPGHTHAREHTRRRPTPEEARTIASWDRDLDA
LTGELLRARAAVTDVPLPVTLTASQVLRLAADPDGFAQELARPMPRPPQPAARRGTRFHA
WVEARFEELTLPVLEPEELPGGDAEIADERDLEALKDAFERTEYAHRTPHRVEAPFQLTI
GGRVIRGRIDAVYKEGDGDAATYEIVDWKTGRDHTADPLQLALYRLAWAEQRGVPLESVN
ATFLYVRTGDVVRPRGLPDRAALERLLLGEPAASAKCEEPPTEDVGAGR
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcccagtatcagcgatcccgatcagctcaaggagctcctcgggattccgttcacc
ccggagcagacggcctgcatcatcgcgccgcccgccccgcaggtgatcgtggccggcgcc
ggatcgggcaagacgacggtgatggcggcccgcgtcgtctggctggtgggcaccgggcag
gtcgccccggagcaggtactgggcctgaccttcaccaacaaggccgccggggaactcgcc
gaacgcgtccgcaaggcgctgatcaaggcgggcgtcaccgacccggacgtcatcgacccg
gacaacccgccgggcgaaccggtcatctcgacctatcacgcgttcgccggccgcctgctg
accgaccacggcctgcgcatcggcctggagccgacctcgcgcctgctcgccgacgccacc
cgcttccagctcgccgcgcgcgtgctgcgggaggcccccggcccctatccggccctcacc
cgctccttcgccgacctcgtcagcgacctgctgaccctcgacgccgaactcgccgagcac
ctcgtgcgccccgaggacgtgcgcgcgtacgacgcggagctgctcggcacccttcagggc
gccaagctcaccaacgccgatctgcgcaaggtccccgaggcggccgccgcccgccgcgaa
ctcgccgacctggtggtccgctaccgcgcggccaaacgcgaacgcgacctgctcgacttc
ggcgaccagatcgccctgtccgcacagctcgcgcggatccccgaggtcggccgcgtcctg
cgcgaggagttccgcgtggtcctcctggacgagtaccaggacacgtccgtggcccaacgc
atccttctggcgggcctgttcggcggcggaaccggccacccggtgaccgccgtcggcgac
ccctgccaggccatctacggctggcgcggcgcgtccgtcgccaacctggacgacttcccc
gagcacttcgcccgccccgacggcagcccagccacccgccaggccctgagcgagaaccgc
cgcagcggcggccgcctcctggacctcgccaacggtctcgccgaacctctgcgcgccatg
cacgcgggcgtggaggccctccgcccggcccccggcgccgaacgggacggcgtcgtccgc
tgcgcgctgcttcccacccacgccgaggagatcgactggatcgccgactcgatcgcccac
ctggtcaacaccggcaaggcccccggcgagatcgccgtcctgtgccgcacggcgagcgac
ttcgccgagatccagggcgcgctcgtcgcccgggacgtccccgtcgaggtggtcgggctg
tccgggctgctgcaccttccggagatcgccgacctggtcgccgtctgcgaagtgctccag
gaccccggcgcgaacgcctccctggtccggctgctgaccggcccccgctggcgcatcggc
ccgcgcgacctcgccctcctgggacgccgggcccggctgctcgtgtcccacgcgcgcgtg
gaggacgacgacgaccgggaccggcggctcgccgaagccgtcgagggggtcgatccgtcg
gaggtgatatcgctcgcggacgccctcgacaccttcctggagatgccgctcgacgcggag
ggagaggacgacggactgccgttctcgccggacgcgcgcgtgcgcttcgcgcgcctggcc
accgaactgcgcgacctgcgccggtcgttgtccgacccgctgatggacgtcctgcaccgc
gtcctcgccgtcaccggcctggaggtggaactgtcggcatccccgcacgccctggccgcc
cgccgccgcgagaccctctccaacttcctcgacgtcgccgcctccttcgccgccggcgac
ggcgaggccaccctgctcgccttcctggccttcctgcgcaccgccgcgcagtacgagaag
ggcctcgacaacgccctgcccggcggagagaacaccgtgaaggtgctcaccgcccacaag
tcgaagggcctggagtgggacgtcgtcgccgtcccgggcctggtcaaggacaccttcccc
agcaccaagggccgcgagaagtggaccgcccagggcaaggtgctgccgcacgcgctgcgc
ggcgacgccgacaccctgcccgacgtcggctcctgggactcccggggcctgaaggccttc
caggaggccatgaaggagcaccagcacaccgaggagctccgcctcggctacgtcaccttc
acccgcccccgctccctcctcctcggctccggccactggtggggccccacacagaagaag
cggcgcggcccctcgagcttcctgctggacctgtacgagcactgcgctgccgggtacggc
gagatcgaggcatgggcggaggagcccgccgaggaccaggagaaccccgtcctgcacacg
gcgagcgccgaccaggtgtggcccctgcccctggacgaggcgtccctcgcccgccgccgg
agggccgccgagaccgtcctcgcccacctggaggacctcgcctcccacgaggacggccac
cccgcggccgtacatgacccggacggtgacgaggacccggactggcccgtaccgccggac
gacgaagagccctacgaggacgaagagccctacgacgaagagccgtacggcgacgaagac
ccctacgacggcgacgcgccctacggggaaggagacccgttccaggacgaggagcccggc
gactgggagagctggtcgcccgaccgcccggcggtcccgcaccaggcgaccggaccgcag
agcgcggcgcacgacggcacgcgcgtgcccggccacacgcacgcgcgtgagcacacccgc
cgccggcccacccccgaggaggcccgcaccatcgcctcctgggaccgcgacctcgacgcc
ctcaccggtgagctcctgcgcgcgcgggcggccgtcaccgacgtccccctgcccgtgacc
ctcaccgcctcgcaggtgctgcggctggccgccgacccggacggcttcgcgcaggagctc
gcgcgccccatgccccgcccgccgcagcccgccgcccgccggggcacccgcttccacgcc
tgggtcgaagcccgcttcgaagagctgaccctgcccgtgctggagccggaggaactgccc
ggcggcgacgccgagatcgccgacgagcgcgacctggaggccctcaaggacgccttcgaa
cgcaccgagtacgcccaccgcacgccccaccgcgtcgaggcacccttccagctcaccatc
ggcggccgggtcatcaggggacgtatcgacgccgtctacaaggagggcgacggcgacgcg
gcgacgtacgagatcgtcgactggaagaccggccgcgaccacaccgccgatccgctccag
ctcgccctgtaccggctcgcctgggccgagcagcgcggcgtccccctggagtccgtcaac
gcgacgttcctgtacgtccgcaccggtgacgtggtgcgaccgcggggcctgccggaccgc
gccgcgctggagcggctgctcctgggcgagccggccgcgtcggcaaagtgtgaggaaccg
cccaccgaggatgtcggtgcgggccgatag
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