Streptomyces sp. CdTB01: AS200_19960
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Entry
AS200_19960 CDS
T04240
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
scx
Streptomyces sp. CdTB01
Pathway
scx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AS200_19960 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scx03019
]
AS200_19960 (groEL)
03110 Chaperones and folding catalysts [BR:
scx03110
]
AS200_19960 (groEL)
03029 Mitochondrial biogenesis [BR:
scx03029
]
AS200_19960 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scx04147
]
AS200_19960 (groEL)
Enzymes [BR:
scx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AS200_19960 (groEL)
Messenger RNA biogenesis [BR:
scx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AS200_19960 (groEL)
Chaperones and folding catalysts [BR:
scx03110
]
Heat shock proteins
HSP60 / Chaperonin
AS200_19960 (groEL)
Mitochondrial biogenesis [BR:
scx03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AS200_19960 (groEL)
Exosome [BR:
scx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AS200_19960 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
AS200_19960 (groEL)
Exosomal proteins of breast cancer cells
AS200_19960 (groEL)
Exosomal proteins of colorectal cancer cells
AS200_19960 (groEL)
Exosomal proteins of bladder cancer cells
AS200_19960 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ALV34066
LinkDB
All DBs
Position
complement(4508128..4509753)
Genome browser
AA seq
541 aa
AA seq
DB search
MAKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVE
IEDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLKNVAAGASPALLKKGID
AAVAAVSEELLASARPIDEKSDIAAVAALSAQDQQVGELIAEAMDKVGKDGVITVEESNT
FGLELDFTEGMAFDKGYLSPYFVTDQERMEAVLDDPYILINQGKISSIADLLPLLEKVIQ
AGSSKPLLIIAEDVEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLQDMAVLTGATV
ISEEVGLKLDQAGLDVLGSARRVTVTKDDTTIVDGAGNSEDVVGRINQIKAEIENTDSDW
DREKLQERLAKLAGGVCVIKVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSALV
HAAKVLDGGLGRTGDEATGVAVVRRAVVEPLRWIAENAGLEGYVITSKVADLDKGQGFNA
ATGEYGDLVKAGVIDPVKVTRSALENAASIASLLLTTETLVVEKKEEEEPAAGGHGHGHS
H
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctgaagttcgacgaggacgcccgtcgcgccctcgagcgcggcgtcaac
aagctggccgacacggtcaaggtgacgatcggccccaagggccgcaacgtcgtcatcgac
aagaagttcggcgcccccaccatcaccaacgacggcgtcaccatcgcccgcgaggtcgag
atcgaggacccgtacgagaacctcggcgcgcagctggtgaaggaggtggcgaccaagacc
aacgacatcgcgggtgacggcaccaccaccgccaccgtgctcgcccaggcgctggtgcgc
gagggcctgaagaacgtggccgcgggtgcctccccggcgctgctgaagaagggcatcgac
gcggccgtcgccgccgtctccgaggagctcctcgcctcggcccgcccgatcgacgagaag
tccgacatcgccgccgtcgccgcgctgtccgcccaggaccagcaggtcggcgagctcatc
gccgaggcgatggacaaggtcggcaaggacggtgtcatcaccgtcgaggagtccaacacc
ttcggtctggagctggacttcaccgagggcatggccttcgacaagggctacctgtccccg
tacttcgtcaccgaccaggagcgtatggaggccgtcctcgacgacccgtacatcctgatc
aaccagggcaagatctcctcgatcgccgacctgctgccgctgctggagaaggtcatccag
gccggctcctccaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctctcg
accctggtcgtcaacaagatccgcggcaccttcaacgcggtcgccgtcaaggcccccggc
ttcggtgaccgccgcaaggcgatgctgcaggacatggcggtcctcacgggcgccacggtc
atctccgaggaggtcggcctcaagctcgaccaggccggtctggacgtgctgggctccgcc
cgccgcgtgaccgtcaccaaggacgacaccaccatcgtcgacggcgccggcaactccgag
gacgtcgtcggccgcatcaaccagatcaaggccgagatcgagaacaccgactccgactgg
gaccgcgagaagctccaggagcgcctcgcgaagctggccggcggcgtgtgcgtgatcaag
gtcggcgccgccaccgaggtggagctgaaggagaagaagcaccgtctggaggacgccatc
tccgcgacccgcgccgcggtcgaggagggcatcgtctccggtggtggctccgcgctggtc
cacgccgccaaggtgctggacggcggcctcggccgcaccggcgacgaggccaccggtgtc
gccgtggtccgccgcgcggtcgtcgagccgctgcgctggatcgccgagaacgccggcctg
gagggctacgtcatcacctccaaggtcgccgacctcgacaagggccagggcttcaacgcc
gccaccggcgagtacggcgacctggtcaaggccggcgtcatcgacccggtcaaggtcacc
cgctccgccctggagaacgccgcctccatcgcctccctgcttctgacgaccgagaccctg
gtcgtcgagaagaaggaagaggaagagccggccgccggcggccacggccacggtcactcc
cactga
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