Streptomyces sp. CdTB01: AS200_23525
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Entry
AS200_23525 CDS
T04240
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
scx
Streptomyces sp. CdTB01
Pathway
scx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AS200_23525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scx03019
]
AS200_23525
Enzymes [BR:
scx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
AS200_23525
Messenger RNA biogenesis [BR:
scx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AS200_23525
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Ortholog
Paralog
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GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
ALV34689
UniProt:
A0A0U3ETM2
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All DBs
Position
5273326..5274768
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AA seq
480 aa
AA seq
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MPNANEDNPRAQSEVPPRMSSEQLSVAPVADDLARRFQEAGFSLALVGGSVRDALLGRLG
NDLDFTTDARPEDVLKIVRPWADAVWEVGIAFGTVGAQKDGFQIEVTTYRSEAYDRTSRK
PEVSYGDSIEEDLVRRDFTVNAMALALPEKTFIDPHEGRADLASRLLRTPGTPEASFSDD
PLRMMRAARFAAQLDFEVAPEVVTAMKEMAGRIEIVSAERVRDELNKLILSANPRKGLTL
LVDTGLADHVLPELPALRLESDEHHRHKDVYEHTLIVLEQAIALEEDGPDLTLRLAALLH
DIGKPRTRRFEKDGRVSFHHHEVVGAKMTKKRMTALKYSNELVKDVSRLVELHLRFHGYG
TGEWTDSAVRRYVRDAGPLLDRLHKLTRSDCTTRNKRKATALSRAYDGLEERIAQLQEQE
ELDAIRPDLDGNQIMQILGVDPGPVIGQAYKHMLELRLENGPMDEETATRALKEWWAGQS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaacgccaacgaagacaacccccgtgcccagagtgaggtgccgccccgcatgtcg
agtgagcagctgtcggtggcccctgtcgccgacgacctcgcccgtcgcttccaggaggcc
gggttctcgctggccctggtcggcggctcggtccgggacgcgttgctcggccggctcggc
aacgacctcgacttcacgaccgacgcgcggcccgaggacgtcctgaagatcgtccggccc
tgggcggatgccgtctgggaggtcggcatcgccttcggcaccgtcggcgcgcagaaggac
ggcttccagatcgaggtgacgacctaccggtcggaggcctacgaccggacgtcgcgcaag
cccgaggtgtcgtatggcgactccatcgaggaggacctcgtccggcgggacttcacggtg
aacgcgatggccctcgcgctcccggagaagacgttcatcgacccgcacgaggggcgcgcc
gacctggcgagccgcctgctgcgcacgccgggcacccccgaggcgtcgttctccgacgac
ccgctgcggatgatgcgggccgcacggttcgccgcccagctggacttcgaggtggctccc
gaggtcgtcacggccatgaaggagatggccggacgcatcgagatcgtgtcggccgagcgg
gtgcgggacgagctgaacaagctgatcctctccgcgaacccgcgcaagggcctgacgctg
ctcgtcgacaccggtctcgcggaccacgtgctgcccgagctcccggccctgcggctggag
agcgacgagcaccaccgtcacaaggacgtgtacgagcacacgctcatcgtcctggagcag
gcgatcgccctggaggaggacgggcccgatctgacgctgcgcctggccgcgctcctccat
gacatcggcaagccccgcacgcgtcggttcgagaaggacggacgggtctcgttccaccac
cacgaggtggtcggggcgaagatgacgaagaagcggatgaccgccctcaagtactccaac
gaactggtgaaggacgtctcccgtctggtcgaactccacctgcgcttccacgggtacggc
accggcgagtggacggactccgccgttcgtcggtacgtccgtgacgccggtccgctcctc
gaccgcctccacaagctcacgcgctccgactgcacgacccgcaacaagcggaaggcgacg
gcgctctcccgcgcctacgacggcctggaggagcgcatcgcccagctccaggagcaggag
gaactggacgcgatccgcccggacctcgacggcaaccagatcatgcagatcctcggagtc
gatccgggtcccgtcatcggccaggcgtacaagcacatgctggaactgcgcctggaaaac
ggccccatggacgaggagaccgccacccgggcgctcaaggagtggtgggccgggcagagc
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