Streptomyces sp. CdTB01: AS200_24265
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Entry
AS200_24265 CDS
T04240
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
scx
Streptomyces sp. CdTB01
Pathway
scx03030
DNA replication
scx03430
Mismatch repair
scx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AS200_24265
03430 Mismatch repair
AS200_24265
03440 Homologous recombination
AS200_24265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scx03032
]
AS200_24265
03400 DNA repair and recombination proteins [BR:
scx03400
]
AS200_24265
Enzymes [BR:
scx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AS200_24265
DNA replication proteins [BR:
scx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AS200_24265
DNA repair and recombination proteins [BR:
scx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AS200_24265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
Rad17
AAA_14
AAA_30
zf-CXXC
AAA_5
AAA_16
AAA_18
AAA_19
nSTAND3
Mg_chelatase
TsaE
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ALV34817
LinkDB
All DBs
Position
5426412..5428748
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AA seq
778 aa
AA seq
DB search
MSSLALYRRYRPESFAEVIGQEHVTDPLQQALRNNRVNHAYLFSGPRGCGKTTSARILAR
CLNCEQGPTPTPCGECQSCRDLARNGPGSIDVIEIDAASHGGVDDARELREKAFFGPAAS
RYKIYIIDEAHMVTSAGFNALLKVVEEPPEHLKFIFATTEPEKVIGTIRSRTHHYPFRLV
PPGTLREYLGEVCQKEDIPVEDGVLPLVVRAGQGSVRDSMSVMDQLLAGAREEGVTYAMA
TSLLGYTDGSLLDSVVEAFATGDGAAAFEVVDRVIEGGNDPRRFVADLLERLRDLVILAA
VPDAAEKGLIDAPADVIERMQAQASTFGAAELSRAADLVNEGLTEMRGANSPRLQLELIC
ARVLLPAAYGDERAVMARLDRLERGVNFSAGGALPTAGYVPGPEAHGAGPAGPGGPGGPA
GPAMPAGAPVAPGGGPAAARAAVRGSGAPGAPAQAAPAVPSPVAPQPTPQTAPQPQPQSS
PPPTPAPAAPAPAAATASAPGAWPTAAPAGGGRRPGGWPTAAPAGGGGQPPATAPSAPAP
APAAASTPAPAAGEPAYAPPSGGLDPRMLWPNILEAVKNRRRFTWILLSQNAHVAGFDGT
TLQLGFVNAGARDNFVSSGSEDVLKAALGEQFSVQWKIEAVVDPSGGSGPPPSGGPSAPS
GFTGGGGGGFAGGGGYGGGGTGGYGGTATAQRSAPAQSAHAAPTSPGASFSPSPNLGPST
GSGPSPAARPSAPEPPPVSIEDDIPEDDDPDLNESALSGRELIVRELGATVVEEFTNE
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtctctcgcgctgtaccgccgctatcgcccggagtcgttcgccgaggtcatcggg
caggagcatgtcaccgacccgttgcagcaggcgctgcggaacaaccgggtcaatcacgcg
tacctgttcagcggtccgcgcggctgcggcaagacgacgagcgcgcgcatcctggcgcgc
tgtctgaactgcgagcagggccccacgcccaccccgtgcggcgagtgccagtcctgccgc
gacctggcgcgcaacggccccggctccatcgacgtcatcgagatcgacgcggcctctcac
ggtggtgtggacgacgcacgtgagctgcgggagaaggcgttcttcggccccgccgccagc
cgttacaagatctacatcatcgacgaggcccacatggtcacgtcggccggcttcaacgcg
ctgctgaaggtcgtcgaggagccgccggagcacctcaagttcatcttcgccacgaccgag
cccgagaaggtcatcgggaccatccggtcgcgcacccatcactacccgttccggctcgtg
ccgccgggcaccctcagggagtacctgggcgaggtctgccagaaggaggacatcccggtc
gaggacggcgtgctgccgctcgtcgtgcgcgcggggcagggctcggtgcgtgactccatg
tcggtcatggaccagctcctcgccggagcgcgggaggagggtgtgacctacgccatggcc
acctccctcctcggctacacggacggctcgctcctcgactccgtcgtcgaggccttcgcc
accggtgacggcgccgccgcgttcgaggtcgtggaccgcgtcatcgagggcggcaacgac
ccgcgccgcttcgtcgccgacctgctggagcggctgcgcgacctcgtcatcctcgccgcc
gtgccggacgccgccgagaagggcctcatcgacgccccggccgacgtcatcgagcggatg
caggcccaggcgagcacgttcggcgccgcggagctcagccgtgccgccgacctggtcaac
gagggcctgaccgagatgcgcggcgccaactcgccccgcctccagctggagctgatctgc
gcgcgtgtgctgctgccggccgcgtacggggacgagcgggcggtgatggcccgcctcgac
cgcctggagcggggcgtgaacttctcggccggcggcgcgctgcccacggcgggatacgtg
ccggggcccgaggcgcacggggcaggcccggcaggccccggaggtcccggcggccccgca
ggtcctgcgatgcccgcaggcgcccccgtggcgcccggtgggggcccggccgcggcccgt
gcggcggtacggggttcgggcgcccccggtgcccccgcgcaggcggcccctgcagtgccg
tcccccgtggcgccccagccgacaccgcagacggctccccagcctcagccccagtcctcg
ccgccgcccactccggctccggctgccccggcccccgccgccgcgaccgcctcggccccc
ggcgcctggcccaccgcggcccccgccggcggcggccgtcggcccggcggctggcccacg
gcggctccggcgggcggtgggggacagcccccggccacggcgcccagcgcgccggctccc
gccccggccgcggcctccactcccgccccggcggcgggggaaccggcctacgccccgccc
agcggcggactcgacccccgcatgctctggccgaacatcctcgaagcggtcaagaaccgc
cgccgcttcacctggatcctgctcagccagaacgcccacgtggccggcttcgacggcacc
accctgcaactgggcttcgtcaacgccggcgcccgcgacaacttcgtcagcagcggcagc
gaggacgtcctgaaggccgcgctgggcgagcagttcagcgtccagtggaagatcgaggcg
gtcgtcgacccgagcggcggctccggcccgcccccctcgggcggcccctcggcgccctcc
ggcttcaccggcggaggcggtggcggcttcgcgggcggaggcggctacggcggaggtggc
acgggcggctacggcggtaccgcgaccgcccagcgctctgctcccgcccagtcggcgcac
gccgcccctacgtcccccggcgcgtccttctcaccgagcccgaacctcggcccgagcacg
ggttcgggcccgtccccggcggcccggccctccgccccggaaccgccgccggtctccatc
gaggacgacatccccgaggacgacgaccccgacctcaatgagtcggccctgtccggccgc
gagctgatcgtgcgggagctgggggcgacggtggtcgaggagttcacgaacgagtag
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