Streptomyces sp. CdTB01: AS200_24455
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Entry
AS200_24455 CDS
T04240
Name
(GenBank) RNA helicase
Organism
scx
Streptomyces sp. CdTB01
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
T3SSipB
Toxin_YhaV
DivIC
Motif
Other DBs
NCBI-ProteinID:
ALV34846
UniProt:
A0A0U3G7Z5
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All DBs
Position
5463953..5466082
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AA seq
709 aa
AA seq
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MSISSTDHVVVSENEGTEDAVEVTFADLGLPEGVVRKLAQNGVTTPFPIQAATIPDALAG
KDILGRGRTGSGKTLSFGLPTMTRLAGGRTEKHKPRAVILTPTRELAMQVADALQPYGDV
LGLKMKVVCGGTSMGNQIYALERGVDILVATPGRLRDIINRGACSLENVEVAVLDEADQM
SDLGFLPEVTELLDQIPAGGQRMLFSATMENEISTLVKRYLSNPVTHEVDSAQGNVTTMS
HHILIVKPKDKAPVTAAIASRKGRTIIFVRTQLGADRIAEQLRDAGVKADALHGGMTQGA
RTRTLADFKDGYVNALVATDVAARGIHVDGIDLVLNVDPAGDHKDYLHRAGRTARAGRTG
TVVSLSLPHQRRQIFRLMEDAGVDAGRHIINSGTAFEPEVAEITGARSMTEVQSESAANA
AQQAEREVAQLTKELERAQRRATELREEADRLVARVARERGEDPEAAVAEAQAVVTEAAE
IVAEASVPAQPAAQDVERTEPAPSYERRERRDNDRGGFRRDDRRDDRGGRSFERRDDRGG
RGFERRDNDRGGFRRDDRRDDRPAGRSFERRDDRGGRGFERRDNDRGFERRDNDRGGFRR
DDRRDDRPAGRSFERRDDRGGRSFERRDNDRGGFRRDDRPAAGRSFERRDERGGHRGSDR
PFNRDRRDDRPGFRSGGHDRPYGRRDDHRGTGTGSFGRRDDKPRWKRNG
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgtccatttccagtactgatcacgtcgtcgtgtccgagaacgagggcaccgaggacgcc
gtcgaggtcaccttcgcggacctcggcctccccgagggcgtcgtgcgcaagctcgcccag
aacggcgtgaccacccccttcccgatccaggccgcgaccatcccggacgccctggccggc
aaggacatcctcggccgtggccgcaccggctccggcaagaccctctccttcggtctgccg
accatgacgcgtctcgccggcggccgcaccgagaagcacaagccgcgcgcggtcatcctc
accccgacccgtgagctcgcgatgcaggtcgcggacgccctccagccctacggcgacgtc
ctcggcctgaagatgaaggtcgtctgcggcggtacgtcgatgggcaaccagatctacgcc
ctcgagcgcggcgtcgacatcctcgtcgccaccccgggccgcctgcgcgacatcatcaac
cgcggcgcctgctccctggagaacgtcgaggtcgccgttctcgacgaggccgaccagatg
tccgacctgggcttcctgcccgaggtcaccgagctcctcgaccagatcccggccggcggc
cagcgcatgctgttctcggccacgatggagaacgagatctccaccctggtcaagcgctac
ctgagcaacccggtcacgcacgaggtcgacagcgcccagggcaacgtcacgaccatgtcg
caccacatcctgatcgtgaagcccaaggacaaggcgccggtcaccgcggccatcgcctcc
cgcaagggccgcaccatcatcttcgtccgcacccagctgggcgcggaccgcatcgccgag
cagctgcgcgacgccggtgtgaaggccgacgcgctgcacggcggcatgacgcagggcgcg
cgcacccgcacgctggccgacttcaaggacgggtacgtcaacgcgctcgtcgcgaccgac
gtcgccgcccgaggcatccacgtcgacggcatcgacctcgtcctgaacgtcgaccccgcc
ggtgaccacaaggactacctgcaccgcgccggccgtaccgctcgcgcgggccgcaccggc
acggtcgtgtccctctccctgccgcaccagcgccgccagatcttccggctgatggaggac
gcgggcgtcgacgccgggcgtcacatcatcaactccggtacggccttcgagccggaggtc
gccgagatcaccggcgcccgttcgatgaccgaggtccagtccgagtccgcggccaacgcg
gcgcagcaggccgagcgcgaggtcgcccagctcaccaaggagctggagcgggcgcagcgg
cgcgcgaccgaactgcgcgaggaggccgaccggctcgtcgcccgggtcgcccgcgagcgc
ggcgaggaccccgaggccgctgtggccgaggcgcaggcggtggtcaccgaggccgccgag
atcgtggccgaggcgtccgtgccggcgcagccggccgcgcaggacgtcgagcgcaccgag
ccggcgccgtcgtacgagcgtcgcgagcgccgggacaacgaccgtggcgggttccgccgt
gacgaccgccgtgacgaccgcggtggccgttccttcgagcgtcgtgacgaccgtggtggc
cgtgggttcgagcgccgtgacaacgaccgtggcgggttccgccgtgacgaccgtcgggac
gaccgtccggccggccgttccttcgagcgtcgtgacgaccgtggcggtcgtggcttcgag
cgccgggacaacgaccgcgggttcgagcgccgtgacaacgaccgtggcgggttccgccgt
gacgaccgccgggacgaccgtccggccggccgttccttcgagcgtcgtgacgaccgtggt
ggccgttccttcgagcgccgggacaacgaccgcggcggcttccgccgtgacgaccgtccg
gccgccggccgttccttcgagcgccgtgacgagcgcggcggtcaccgtggcagcgaccgt
ccgttcaaccgcgaccgccgtgacgaccgtccgggcttccgctccggcggccacgaccgc
ccctacggccgtcgtgacgaccaccgtggcaccggcaccggttccttcggccgccgcgac
gacaagccgcgctggaagcgcaacggctga
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