Streptomyces sp. CdTB01: AS200_25525
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Entry
AS200_25525 CDS
T04240
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
scx
Streptomyces sp. CdTB01
Pathway
scx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
scx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AS200_25525
09124 Replication and repair
03420 Nucleotide excision repair
AS200_25525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scx03021
]
AS200_25525
03400 DNA repair and recombination proteins [BR:
scx03400
]
AS200_25525
Enzymes [BR:
scx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AS200_25525
Transcription machinery [BR:
scx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AS200_25525
DNA repair and recombination proteins [BR:
scx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AS200_25525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
ETAA1
AAA_22
IMD
Motif
Other DBs
NCBI-ProteinID:
ALV35032
UniProt:
A0A0U3NQJ7
LinkDB
All DBs
Position
complement(5704078..5705721)
Genome browser
AA seq
547 aa
AA seq
DB search
MNGPLIVQSDKTLLLEVDHERADECRRAIAVFAELERAPEHIHTYRMTPLGLWNARAAGH
DAEQVVDALVQFSRYPVPHALLVDVAETMDRYGRLTLSKHPAHGLVLTTTDRPVLEEVLR
SKRVAPLVGARIDSDTVAVHPSERGQIKQTLLKLGWPAEDLAGYVDGEAHPIELAEDGWA
LRPYQKQAVENFWHGGSGVVVLPCGAGKTLVGAGSMAQAKSTTLILVTNTVSARQWKHEL
VKRTSLTEDEIGEYSGTRKEIRPVTIATYQVLTTKRKGVYPHLELFDSRDWGLIVYDEVH
LLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPA
DCVEVRVNLTDSERLAYATAEQEEKYRFCATTATKRKVTEALVRRFAGQQILVIGQYIDQ
LDELGEHLNAPVIKGETSNAQREKLFDAFREGEISVLVVSKVANFSIDLPEATVAIQVSG
TFGSRQEEAQRLGRVLRPKADGHQAHFYSVVARDTIDQDFAAHRQRFLAEQGYAYRIVDA
DEILAEG
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggtcctctcatcgtccagtccgacaagaccctgctcctggaggtcgaccacgag
cgggccgacgagtgccgtcgtgccatcgcggtcttcgcggagctggagcgggcgcccgag
cacatccacacctaccggatgactccgctgggactgtggaacgcgcgtgccgccgggcac
gacgccgagcaggtcgtcgacgcgctggtgcagttcagccgctacccggtgccgcacgcc
ctgctcgtggacgtcgccgagacgatggaccgctacggccggctgacgctgagcaagcac
cccgcgcacggcctggtgctgaccaccaccgaccggccggtgctggaggaggtgctgcgc
tccaagcgcgtcgcgccgctggtcggcgcccgcatcgactcggacaccgtcgccgtgcac
ccctccgagcgcgggcagatcaagcagaccctgctgaagctgggctggccggccgaggac
ctcgccgggtacgtggacggcgaggcgcatccgatcgagctcgccgaggacggctgggcg
ctgcggccctaccagaagcaggccgtggagaacttctggcacggcggcagcggggtcgtg
gtgctgccctgcggggccggcaagacgctggtgggcgccgggtcgatggcgcaggccaag
tccacgacgctgatcctcgtcaccaacaccgtctccgcccggcagtggaagcacgagctg
gtgaagcggacctcgctgaccgaggacgagatcggcgagtacagcgggacccgcaaggag
atccggcccgtcaccatcgccacctaccaggtgctgacgacgaagcggaagggcgtctat
ccgcacctggagctgttcgactcccgggactgggggctgatcgtctacgacgaggtgcac
ctgctgccggccccggtgttcaagttcaccgccgacctgcaggcgcggcgccggctcggg
ctgacggcgaccctggtgcgcgaggacggccgtgagtcggacgtgttctcgctgatcggc
cccaagcggttcgacgctccatggaaggagatcgaggcgcagggctacatcgccccggcc
gactgcgtggaggtccgggtcaacctcaccgactccgagcggctcgcgtacgccaccgcc
gagcaggaggagaagtaccgcttctgcgcgaccaccgcgaccaagcggaaggtcaccgag
gcgctggtgcgccgcttcgccgggcagcagatcctcgtcatcggccagtacatcgaccag
ctcgacgagctgggcgagcacctgaacgcgcccgtcatcaagggcgagacctccaacgcc
cagcgcgagaagctcttcgacgccttccgcgagggcgagatcagcgtgctggtggtgtcg
aaggtcgcgaacttctccatcgacctgccggaggcgacggtcgcgatccaggtgtccggc
accttcggttcgcggcaggaggaggcccagcggctggggcgggtgctgcggccgaaggcc
gacggccaccaggcgcacttctactcggtggtcgcccgggacaccatcgaccaggacttc
gccgcgcaccggcagcggttcctcgcggagcaggggtacgcctaccggatcgtggacgcc
gacgagatcctggcggagggctga
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integrated database retrieval system
