Streptomyces sp. CdTB01: AS200_27720
Help
Entry
AS200_27720 CDS
T04240
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
scx
Streptomyces sp. CdTB01
Pathway
scx03420
Nucleotide excision repair
scx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AS200_27720
03430 Mismatch repair
AS200_27720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scx03400
]
AS200_27720
Enzymes [BR:
scx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AS200_27720
DNA repair and recombination proteins [BR:
scx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AS200_27720
MMR (mismatch excision repair)
Other MMR factors
AS200_27720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
Cas_Cas4
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ALV35413
UniProt:
A0A0U3PUM0
LinkDB
All DBs
Position
6229954..6232920
Genome browser
AA seq
988 aa
AA seq
DB search
MNVDVEQALGGWLTPEQYGAAVAPEDEVLALAGAGSGKSRTLAGRVAYKIANGASPESVV
AFTFTEKAGEQIKTRVAQALKVCGVDPLLVGGMYIGTIHAWCRRVLGDMDARYRQFDVLD
EMQFLVYLISRYPKLNINPLRDAHPTAKGNRRGYFETLKELSRAWHMMNDELLDPAQIAA
EDPALGEALERLRDQMEQDNFIDFSLMQRLVVEALEAQEPGAVQALALLRHVLVDEYQDV
NVVQERLIGLMHQNSETLFVVGDDDQAIYGWRGADVTNILEFNRRYPTAAVHKLLTNFRS
TSAIVEAAGDFAAQELGPSRLPKQLHAAANHDPREFAVLNFPVRAVEAEFVAERIDELLG
TAYEESDGTVRGLTPADFAILMRSTGQPESDGTKRHTAYIQALDARNIPYDLNAGGQLFD
RAQPAAVRSAFELLRDAMPDRTQVEDLFHSQLKKAFPQADLSRVIRVFADWGRRIHAPIA
PGLPRQRLFPQQLLHDLLEALDVANSGFDDGVMADLGTFSRILQDIETVYLSIDGKPRFG
ELLNFLQNVAGDGYETDNQMMARPDAVTVSTVHKAKGLEFPVVFVVDVENGRFPGRRRSY
DGWIPETLIQQAIDNGSYQTGPHDQARLFYTAITRAERFLYVTGSALLPGGKRLTKTSPY
AVRLNHPEIRRDLLDPAAPPRVVPPVEAQRRRGDESVLPTTYSQIHTFMRCPHAYKLSVV
NGFSPPIPELFGFGRAVHAAVGKLHQAYKDKAPTSDEARAIAENMFHLKHVAPSSDPVDR
PGAYERAKQKSSDIVSDYVDKYGTDFELKRQVELPFEIPVEGAVISGAIDLLLSVDDADT
IHDAKVIDFKTMAGGPEPTNNPDLNWEDLSLQVQLYGRGAEQVHGMNARTGAVHLLKDGQ
RVQVPVDADAVDAAVANVEWAVSRITDGDFPQRGSRTKCGDCDFAQICSKKLQPFKTEEE
PPDLHLPDGTNGKRFLKVSAFSRTGPNE
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtggacgtagagcaggcgcttggagggtggctcaccccggagcagtacggagcc
gccgtcgcgccggaggacgaagttctcgcgctcgcgggtgcggggtccgggaagtcgcgc
accctggccggtcgggttgcctataagatcgccaacggtgcgagtcccgagtcggtcgtc
gcattcaccttcaccgagaaggccggcgagcagatcaagacgcgcgttgcgcaagccctg
aaggtgtgtggggtggaccccctcctggtcgggggcatgtacatcgggactatccacgca
tggtgtcgtcgcgtcctcggcgacatggacgctcgctaccgtcagttcgacgtcctcgac
gagatgcagttcctcgtctacctgatctctcggtaccccaagctcaacatcaatcccctg
cgcgacgcgcaccccaccgcgaaggggaacaggcgggggtatttcgagacgctcaaggag
ctgagccgcgcctggcacatgatgaacgacgagctgctcgatcctgcacagatcgccgcc
gaagaccctgcgctgggtgaagccctggagcggctccgtgaccaaatggagcaggacaac
ttcatcgacttctcactcatgcagcgcctcgtcgttgaggccctcgaagcgcaggaacca
ggcgcagttcaggcactcgcactgctgcgtcacgtactcgtggacgagtatcaggacgtc
aacgtcgtgcaggagcggctcattgggctcatgcaccagaactccgaaaccctcttcgtc
gtcggagacgacgaccaggctatctacgggtggcggggggccgatgtcaccaacatcttg
gagttcaaccgccggtaccccacggccgctgtccacaagctgctgaccaatttccggtcc
acctcggcgatcgtcgaggccgccggcgactttgcagcacaggagctcggtccctcacgg
ctgccgaagcagttgcacgcggccgcgaatcatgacccgcgagagttcgccgtactgaac
ttccccgtgcgcgccgtggaagccgagttcgtcgccgaacgcatcgacgagctgctcggt
acggcctacgaggaatccgatggcaccgtgcgcggcctaacccccgccgacttcgccatc
ctcatgcgttcaacgggacagccggaatcggacggcactaagcgccacacggcctacatc
caggctctggacgcacgcaacatcccgtacgacctgaacgccggtgggcagctcttcgat
cgggcacagccagcagccgtccgtagcgctttcgagttgttgcgcgacgcgatgccggac
cgcactcaagtcgaagacctcttccattcgcaactcaagaaggcctttccccaggcagat
ctcagccgcgtcatccgagtgttcgcagactgggggcgccgcatccacgctcccatcgcc
ccaggcctgccgcgacagcggctcttcccgcagcagctcctgcacgatctgcttgaggcc
cttgatgtcgccaacagcgggttcgacgatggagtcatggcggacctgggtacgttcagc
cgcatcctccaggacatcgagaccgtctatctctcgatcgacggcaagccacgtttcggt
gaacttctgaacttcctgcagaacgtggctggcgacggctacgagaccgacaaccagatg
atggctcgtccggacgcagtcacggtctccacggtccacaaggccaaggggcttgagttc
cccgtggtgttcgtcgtggatgtcgagaacggacgcttccccgggcgacgccggagctac
gacggctggattccggagaccttgatccagcaggcgatcgacaacggctcgtatcagacc
ggtccccacgaccaggcccgcctcttctacacggcgatcacacgtgctgaacgcttcctc
tatgtcactggttccgcactgcttcccggaggtaagcggctcacgaagacctcgccgtat
gcggttcggctgaatcatcctgagatcaggcgagacctcctggacccggctgctccgccg
cgcgtcgtgcctccggtggaagcgcagcgtcggcgtggcgatgagtcggtgctcccgacg
acgtactctcagatccacaccttcatgcggtgtccgcatgcttacaagctgagcgtcgtg
aacgggttctcgccgccgatcccggagctctttggcttcggccgggctgtgcatgccgcc
gtggggaagctccaccaggcgtacaaggacaaggcgcctacctccgacgaagccagggct
atcgcggagaacatgttccacctcaagcacgttgcccccagctctgacccggtcgatcgc
cccggtgcatacgagcgggcaaaacagaagtcctcggacatcgtgtctgactacgtggac
aagtacggcaccgacttcgaattgaagcgacaggtcgagcttcccttcgaaatccccgtg
gagggggccgtcatctcgggagccatcgacctccttctgagcgtggatgatgcggacacg
atccacgacgccaaggtcatcgacttcaagaccatggcggggggacccgagccgaccaac
aaccctgacttgaactgggaggatctgtctctccaggtgcagctctacgggaggggcgcc
gagcaggttcacggcatgaatgcgcggacaggtgccgtgcacctgctcaaggacgggcag
cgtgtgcaggttcccgttgacgccgatgcggtggacgccgcggtcgccaatgtggagtgg
gcggttagtcgaatcaccgatggtgactttccgcagcgtggctcccgcaccaagtgtggt
gattgcgatttcgcgcagatctgctcgaagaagctgcagcccttcaagaccgaggaggaa
ccgccggacctgcatttgccggacggaaccaacgggaagcgcttcctgaaggtgagcgcc
ttctctcgcacgggaccgaacgagtag
DBGET
integrated database retrieval system
