Streptomyces sp. CdTB01: AS200_28085
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Entry
AS200_28085 CDS
T04240
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
scx
Streptomyces sp. CdTB01
Brite
KEGG Orthology (KO) [BR:
scx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scx03400
]
AS200_28085
DNA repair and recombination proteins [BR:
scx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
AS200_28085
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
STN
Motif
Other DBs
NCBI-ProteinID:
ALV35475
UniProt:
A0A0U3Q328
LinkDB
All DBs
Position
complement(6310632..6311033)
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AA seq
133 aa
AA seq
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MSRQLSKDTAVELAVRRLLHAAGLRYRVEYPVPGMARRRIDVAFTRAKVAVLIDGCFWHG
CPEHATQPKANAEWWRKKLDRNMARDRETTQHLIAEGWTVLRFWEHEAPEEVAVRVGAAV
EQRRTGRVGGKED
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggcaactcagcaaggacacagcggtcgaactggcggttcgacgcctgctccac
gcggcagggctgcgctaccgcgtggagtacccggtgcccggcatggcccgacgccggatc
gacgtggcgttcacacgggcgaaggtggccgtcctgatcgacggttgtttctggcacggc
tgccccgaacatgcgacgcagccgaaagccaacgcggagtggtggcgcaagaaactggac
cggaacatggcccgcgaccgggagaccacgcagcatctgatcgcggaaggctggacggtg
ctgagattctgggagcacgaggctcccgaggaggtcgccgtacgggtgggggcggccgtg
gaacaacgacggacgggacgtgtcggggggaaagaggattga
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