Streptomyces sp. CdTB01: AS200_30010
Help
Entry
AS200_30010 CDS
T04240
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
scx
Streptomyces sp. CdTB01
Pathway
scx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AS200_30010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scx03400
]
AS200_30010
DNA repair and recombination proteins [BR:
scx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AS200_30010
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AS200_30010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF7573
Motif
Other DBs
NCBI-ProteinID:
ALV35808
LinkDB
All DBs
Position
6752536..6753282
Genome browser
AA seq
248 aa
AA seq
DB search
MSLFRDDGVVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQ
FFARGSELVGRSLPLCTQSETIAPYGGGIVTDYARYTAGTAMLETAERFTDHEGEPAVQQ
YLLLVGALRTLARGEHAPHLVLDAFLLRSLAVNGYAPSFGDCAKCGMPGPNRFFSVASGG
AVCVDCRVPGSVVPSPQTLELLAALLTGDWETADACEPRHVREGSGLVSAYLHWHMERGL
RSLRYVEK
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttttccgggacgacggcgtcgtcctgcgcacccagaaactgggcgaggcggac
cggatcatcacgctgctcacgcgcgggcacggacgggtgcgggccgtggcccggggagtg
cggcgcaccaagtccaagttcggcgcccgcctcgaacccttctcccacgtcgacgtccag
ttcttcgcccggggcagcgaactggtggggcgcagcctgccgctgtgcacgcagagcgag
accatcgccccgtacggcggggggatcgtcaccgactacgcccgctacaccgccggcacc
gccatgctggagaccgccgagcggttcaccgatcacgagggcgagccggcggtgcagcag
tacctgctgctcgtcggcgccctgcgcaccctggcccgcggcgagcacgccccgcacctc
gtgctggacgccttcctgctgcgctccctcgccgtcaacggctacgcccccagcttcggc
gactgcgccaagtgcggcatgcccggcccgaaccgcttcttctccgtcgcctccggcggc
gcggtctgcgtggactgccgggtgcccggcagcgtcgtaccttccccgcagaccctggag
ctcctcgccgcgctgcttacgggagactgggagaccgcggacgcgtgcgagccgcggcac
gtgcgggaggggagcgggctggtgtccgcctatctgcactggcacatggaacgcgggctg
cgttcgcttcgttacgtagagaagtaa
DBGET
integrated database retrieval system
