Streptomyces sp. CdTB01: AS200_32595
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Entry
AS200_32595 CDS
T04240
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
scx
Streptomyces sp. CdTB01
Pathway
scx03030
DNA replication
scx03430
Mismatch repair
scx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AS200_32595
03430 Mismatch repair
AS200_32595
03440 Homologous recombination
AS200_32595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scx03032
]
AS200_32595
03400 DNA repair and recombination proteins [BR:
scx03400
]
AS200_32595
Enzymes [BR:
scx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AS200_32595
DNA replication proteins [BR:
scx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AS200_32595
DNA repair and recombination proteins [BR:
scx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AS200_32595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
ALV36264
UniProt:
A0A0U3NU49
LinkDB
All DBs
Position
7327009..7330548
Genome browser
AA seq
1179 aa
AA seq
DB search
MSKPPFTHLHVHTQYSLLDGAARLKDMFNACNEMGMTHIAMSDHGNLHGAYDFFHSAKGA
GVTPIIGIEAYVAPESRRNKRKIQWGQPHQKRDDVSGSGGYTHKTMWAVNATGLHNLFRL
SSDAYAEGWLQKWPRMDKETISQWSEGIVASTGCPSGEVQTRLRLGQFDEALKAAADYQD
IFGKDRYFLELMDHGIDIEHRVRDGLLEIGKKLGIPPLVTNDSHYTYAHEATAHDALLCI
QTGKNLSDPDRFKFDGTGYYLKSTDEMYAIDSSDAWQEGCRNTLLIAEMVDTAGMFEKRD
LMPKFDIPEGYTEVTWFKEEVRRGMERRFPGGIPEDRQKQADYEMDVIISMGFPGYFLVV
ADFIMWAKNNGIAVGPGRGSAAGSIVAYAMGITDLDPIPHGLIFERFLNPERISMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRITKAMP
ADVLGKGIDLNGITDPSHPRYSEAGEVRAMYENEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSETITEHVPVWVRHTDGVTITQWDYPSCESLGLLKMDFLGLRNLTIMDDAVKMVKS
NKGIDIDLLSLPLDDPTTFELLQRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVSALY
RPGPMGMDSHTNYALRKNKLQEITPIHPELEEPLREVLDVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPDELAKNFTIFQAGAQKNGYSDEAIQALWDVLVPFAGYAFNKA
HSAAYGLVSYWTAYLKANHPAEYMAALLTSVKDDKDKSAIYLNECRRMGIRVLPPNVNES
VHNFAAQGDDVILFGLEAVRNVGTNVVESIIKARKAKGKYASFPDYLDKVDATACNKRTT
ESLIKAGAFDTLGHTRKGLTAQYEPMIDNVVAVKRKEAEGQFDLFGGMGEEETSEPGFGL
DVQFTDEEWDKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGIAQLTGGEHADGAVV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDAVVFVKGRL
DKREDVPRLVAMELQVPDLSNAGTNAPVILTIPATRVTPPMISRLGEILTHHKGESEVRI
KLQGPTKTTVLRLDRHRVKPDPALFGDLKVLLGPSCLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaagccgccgttcacgcacctgcacgtccacacccagtactcgctgctggacggt
gccgcgcggctcaaggacatgttcaacgcctgcaacgagatgggcatgacgcacatcgcc
atgtccgaccacggcaacctccacggggcgtacgacttcttccactccgcgaagggtgcc
ggggtcaccccgatcatcggcatcgaggcgtacgtcgccccggagtcccggcgcaacaag
cgcaagatccagtggggccagccgcaccagaagcgggacgacgtgtccggttccggtggt
tacacccacaagaccatgtgggccgtgaacgcgacgggtctgcacaacctcttccgcctc
tcctcggacgcctacgccgagggctggctgcagaagtggccccgcatggacaaggagacc
atctcgcagtggtccgaggggatcgtcgcctccaccggctgcccctccggcgaggtgcag
acccgcctcaggctcggccagttcgacgaggccctcaaggcggccgccgactaccaggac
atcttcggcaaggaccgctacttcctggagctgatggaccacggcatcgacatcgagcac
cgggtccgtgacggtctgctggagatcggcaagaagctcggcatccccccgctggtcacc
aacgactcgcactacacgtacgcgcacgaggcgaccgcccacgacgccctgctgtgcatc
cagaccggcaagaacctctccgaccccgaccgcttcaagttcgacggcaccggctactac
ctgaagtccacggacgagatgtacgccatcgactcctcggacgcctggcaggagggctgc
cgcaacacccttctgatcgccgagatggtcgacaccgccggcatgttcgagaagcgcgac
ctcatgcccaagttcgacatccccgagggctacaccgaggtcacctggttcaaggaggag
gtccgccgcggcatggagcgccgcttccccggcggcatccccgaggaccgccagaagcag
gccgactacgagatggacgtcatcatctcgatgggcttccccggctacttcctcgtcgtc
gccgacttcatcatgtgggccaagaacaacggcatcgcggtcggccccggccgaggctcc
gcggccggctcgatcgtcgcctacgccatgggcatcaccgacctcgaccccatcccgcac
ggcctgatcttcgagcgcttcctcaaccccgagcgcatctccatgcccgacgtcgacatc
gacttcgacgagcgtcggcgcgtcgaggtcatccggtacgtgaccgagaagtacggcgcc
gacaaggtcgccatgatcggcacctacggcaagatcaaggccaagaacgcgatcaaggac
tccgcgcgcgtgctgggctacccgtacgcgatgggcgaccgcatcaccaaggcgatgccc
gccgacgtcctcggcaagggcatcgacctcaacggcatcaccgacccctcgcacccccgc
tactcggaggcgggcgaggtccgggccatgtacgagaacgaaccggacgtgaagaaggtc
atcgacaccgccaagggcgtcgagggcctggtccggcagatgggcgtgcacgccgccggc
gtgatcatgtccagcgagaccatcaccgagcacgtgcccgtctgggtcaggcacaccgac
ggcgtgaccatcacgcagtgggactacccgagctgcgagtcgctcggcctgctgaagatg
gacttcctcggcctgcgcaacctgacgatcatggacgacgccgtgaagatggtgaagtcc
aacaaggggatcgacatcgatctcctcagtctcccgctggacgaccccacgaccttcgaa
ctgctccagcgcggcgacaccctgggcgtcttccagttcgacggcggccccatgcgctcg
ctgctgcgcctgatgaagccggacaacttcgaggacatctccgccgtctccgcgctctac
cgtcccggcccgatgggcatggactcgcacaccaactacgccctgcgcaagaacaagctc
caggagatcaccccgatccatcccgagctggaggagccgctcagggaggtcctggacgtc
acctacggcctgatcgtctaccaggagcaggtgcagaaggccgcccagatcatcgccggc
tactcgctcggcgaggccgacatcctccgccgcgtcatgggcaagaagaagcccgacgaa
ctggcgaagaacttcaccatcttccaggccggcgcccagaagaacggctacagcgacgag
gccatccaggccctgtgggacgtgctggtgcccttcgccggctacgccttcaacaaggcc
cactcggccgcgtacggcctggtgtcgtactggacggcctacctgaaggccaaccacccc
gccgagtacatggccgccctgctgacctccgtcaaggacgacaaggacaagtcggcgatc
tacctcaacgagtgccgccgcatgggcatcagggtgctcccgccgaacgtcaacgagtcg
gtgcacaacttcgccgcgcagggcgacgacgtgatcctcttcggcctggaggccgtccgc
aacgtcggcacgaacgtcgtcgagtcgatcatcaaggcccgcaaggccaaggggaagtac
gcctccttccccgactacctcgacaaggtcgacgccaccgcctgcaacaagcgcaccacc
gagtcgctgatcaaggccggcgccttcgacaccctcggccacacccgcaaggggctcacg
gcccagtacgagccgatgatcgacaacgtggtcgcggtcaagcgcaaggaggccgagggc
cagttcgacctcttcggcgggatgggcgaggaggagaccagcgagcccggcttcggcctc
gacgtgcagttcaccgacgaggagtgggacaagacctatctgctcgcccaggagcgggag
atgctcggtctgtacgtctccgaccacccgctcttcggcctggagcacgtcctgtccgac
aaggccgacgcgggcatcgcccagctcaccggcggcgagcacgcggacggcgcggtcgtc
accatcggcgggatcatctccggcctgcagcgcaagatgaccaagcagggcaacgcctgg
gcgatcgccaccgtcgaggacctcgccggctccatcgagtgcatgttcttccccgcgacc
taccagctggtgtcgacccaactcgtcgaggacgccgtggtgttcgtcaagggccgcctc
gacaagcgcgaggacgtgccccggctggtcgcgatggagctccaggtcccggacctgtcc
aacgcgggcaccaacgcgcccgtgatcctcaccatcccggccacccgcgtcaccccgccg
atgatcagccgcctcggcgagatcctcacccaccacaagggcgagagcgaggtccgcatc
aagctccagggcccgacgaagacgaccgtgctgcggctggaccggcaccgggtcaagccc
gacccggcgctcttcggcgacctgaaggtgctgctcggcccgtcctgcctggccggctga
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