Streptomyces sp. CdTB01: AS200_34110
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Entry
AS200_34110 CDS
T04240
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
scx
Streptomyces sp. CdTB01
Pathway
scx03030
DNA replication
scx03430
Mismatch repair
scx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AS200_34110
03430 Mismatch repair
AS200_34110
03440 Homologous recombination
AS200_34110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scx03032
]
AS200_34110
03400 DNA repair and recombination proteins [BR:
scx03400
]
AS200_34110
Enzymes [BR:
scx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AS200_34110
DNA replication proteins [BR:
scx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AS200_34110
DNA repair and recombination proteins [BR:
scx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AS200_34110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
PTCB-BRCT
RNase_H_2
HisKA_3
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ALV36542
LinkDB
All DBs
Position
complement(7656281..7657261)
Genome browser
AA seq
326 aa
AA seq
DB search
MLEDPTTAASLPTGWPAAYPPGYAVVDVETTGLARDDRIISAAVYRLDAHGEVEDHWYTL
VNPERDPGPVWIHGLTSEMLESAPLFTDIAEEFATRLEGRVLVAHNAVFDWQMIAREYAR
ARREAPVRQRLCTIALSKELALPLPNHKLESLAAHFGVVQRRAHHALDDARVLAEAFRPS
LRAAAAGGVRLPLLECRPLTEFTDRPVPRQAGGYGGYRPTSWRPSRKRPVCPHPNPGRYE
DGKPLKQGMRVAFSGDTSVERELLEDRAAEAGLHVATSLSRLTSLLVTNDPDSGTSKVVK
ARQYGTPVVDEAAFGQLLRDVEPADE
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaagaccccacgaccgcagcgtccttgcccaccgggtggccggcggcgtatccc
cctggatacgcggtcgttgacgtggagacgaccggcctggcccgggacgaccgcatcatc
tccgcggccgtctaccggctggacgcgcacggcgaggtcgaggaccactggtacacgctc
gtcaacccggagcgggacccgggcccggtgtggatccacggcctgacgagcgagatgctg
gagagcgcgcctcttttcacggacatcgccgaggagttcgcgacgcgcctggagggccgg
gtgctcgtcgcgcacaacgcggtcttcgactggcagatgatcgcgcgggagtacgcgcgc
gcccggcgggaggcgccggtgcggcagcggctgtgcaccatcgcgctctccaaggagctg
gcgctgccgctgcccaaccacaagctggagtcgctggccgcccacttcggcgtggtgcag
cggcgcgcgcaccacgcgctggacgacgcgcgggtgctggcggaggcgttccggccgagc
ctgcgggccgcggcggcgggcggcgtacggctgccgctgctggagtgccggccgctgacg
gagttcacggaccggccggtgccccgccaggcgggcggctacggcggctatcggccgacg
agttggcgcccctcccgtaaaaggcccgtatgcccccatcccaacccgggccgctacgaa
gacggcaaaccgctcaagcagggcatgcgggtcgccttctccggggacacctccgtcgag
cgggagctgctggaggaccgcgcggccgaggccggcctgcacgtcgccaccagcctgtcc
cggctgaccagcctgctggtcaccaacgaccccgactcgggcacgtcgaaagtggtcaag
gcccggcagtacgggacgccggtggtggacgaggcggcgttcggacagctgctcagggac
gtcgaaccggcggacgagtga
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