KEGG   Streptomyces sp. CdTB01: AS200_38255
Entry
AS200_38255       CDS       T04240                                 
Name
(GenBank) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
scx  Streptomyces sp. CdTB01
Pathway
scx00040  Pentose and glucuronate interconversions
scx01100  Metabolic pathways
scx02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:scx00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    AS200_38255
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AS200_38255
Enzymes [BR:scx01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     AS200_38255
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix
Other DBs
NCBI-ProteinID: ALV37288
UniProt: A0A0U3NX47
LinkDB
Position
complement(8567615..8568592)
AA seq 325 aa
MRTRPPRTHTQRSTAVTAAAAALAAVTVLVLPQSASAAESSPVGFGAGTTGGGSASATTV
TTLSAFKSAVTGSTAKVVRVSGLISLSGQVDVGSNTTVLGVGSSSGFTGGGLRLKNATNV
IVRNLNISKAVGTDAITVQKSTKVWIDHNSLSSDRDHGKDYYDGLVDITHASDYVTVSWN
TFKDHYKGSLVGHSDNNASEDTGHLRVTYHHNWFDNVNSRIPSLRFGTGHFYDNYVVGAE
TAVHSRMGAQMLVENNVFRSTQVAVTTSRDSDEDGYANLKGNDLGGATTEISQVGTFTSP
PYGYTAEPASSVVASVTGGAGAGKL
NT seq 978 nt   +upstreamnt  +downstreamnt
atgcgtactcgccccccacgtacacacacgcaaagatccacggcagtgacggccgcggcg
gccgccctcgccgccgtcaccgtcctcgtcctgccccagtccgcctcggcggcggagtcc
tcaccggtcgggttcggcgccggcaccaccggcggcggcagcgcctccgcgacgaccgtc
acgacgctgtcggcgttcaagtcggccgtgaccggaagcaccgcgaaggtcgtcagggtc
agtggcctgatctccctgagcggccaggtggacgtcggctccaacaccacggtgctcggc
gtcggttcgtcgtccgggttcaccggaggcggactgcggctgaagaacgccacgaacgtg
atcgtccgcaacctgaacatcagcaaggccgtcggcacggacgccatcacggtccagaag
tcgaccaaggtgtggatcgaccacaactccctgtcctccgaccgcgaccacggcaaggac
tactacgacggcctggtcgacatcacccacgcgtccgactacgtgaccgtctcctggaac
accttcaaggaccactacaagggttccctggtcggtcacagcgacaacaacgcgagcgag
gacaccgggcacctgcgggtgacgtaccaccacaactggttcgacaacgtcaactcccgc
attccgagcctgcgtttcggcaccgggcacttctacgacaactacgtcgtcggcgccgag
accgccgtgcactcccgcatgggcgcgcagatgctcgtcgagaacaacgtcttccgctcc
acccaggtcgccgtcaccaccagccgcgacagcgacgaggacggctacgccaacctcaag
ggcaacgacctgggcggcgccaccaccgagatctcgcaggtcgggaccttcaccagcccg
ccctacggctacaccgccgagccggcctcctccgtcgtcgcctcggtgaccggcggcgcg
ggcgccggaaagctctga

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