KEGG   Streptomyces sp. CdTB01: AS200_41045
Entry
AS200_41045       CDS       T04240                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03090  RNA polymerase sigma-B factor
Organism
scx  Streptomyces sp. CdTB01
Brite
KEGG Orthology (KO) [BR:scx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scx03021]
    AS200_41045
Transcription machinery [BR:scx03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AS200_41045
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r4_2 Sigma70_r3 HTH_23 HTH_Crp_2 KORA DUF7343 MarR_2 DUF4423 HTH_3 Sigma70_ECF HTH_24 GerE MarR HTH_28 DUF134 YdaS_toxin
Other DBs
NCBI-ProteinID: ALV37755
LinkDB
Position
9188915..9189769
AA seq 284 aa
MLIDTSTSRPGTQAPQSAAARRHDDAPDTAELFARLTVLEDGPEREAVRDELVTAWLPMA
HRIAGRFRDRGESVEDLRQVAALGLVKAIDRFDPERGAFESYAVPTITGEVKRHFRDRMW
ALRVPRRVQELRNKVRVARRELTQTPGSPEPTVAALAAHTGLTEDEINCGLEALESFSTL
SLDAELAGDDGYSLADTLGAPDASYDVVVDRESAKESLRRLPERERAILYMRFFEDMTQS
RIADQLGISQMHVSRLISRSCARVRAEAMGQGGRKGGGHGPSAA
NT seq 855 nt   +upstreamnt  +downstreamnt
atgctcatcgacacctcgaccagccgtcccggcacgcaggccccgcagagcgccgccgcg
cggcgccacgacgacgcccccgacacggcggagctcttcgcccgcctgaccgtcctggag
gacggccccgagcgggaggccgtacgcgacgaactggtcaccgcctggctccccatggcc
caccgcatcgccggccgcttccgcgaccgcggcgagtcggtggaggacctgcgccaggtc
gccgccctcgggctcgtcaaggccatcgaccggttcgacccggagcgcggagccttcgag
agctacgccgtgcccaccatcaccggcgaggtcaagcggcacttccgggaccggatgtgg
gcgctgcgtgtgccccgccgcgtccaggaactgcgcaacaaggtccgcgtggcccgccgc
gagctcacccagacgcccggcagccccgaacccaccgtcgcggccctcgccgcccacacc
gggctcaccgaggacgagatcaactgcggcctggaagccctggagagcttcagcaccctt
tccctggacgccgagctcgccggcgacgacggctacagcctcgcggacaccctgggcgcc
cccgacgcgtcgtacgacgtcgtggtcgaccgcgagtccgccaaggagagcctgcgtcgc
ctgcccgagcgcgagcgcgccatcctctacatgcgcttcttcgaggacatgacacaaagc
cggatcgccgaccagctcggcatctcccagatgcacgtctcacgcctgatcagccgcagc
tgcgcccgggtccgcgccgaggccatgggccagggcggccgcaagggcggcggacacggg
ccgagcgcggcctga

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