Streptomyces sp. CdTB01: AS200_41685
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Entry
AS200_41685 CDS
T04240
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
scx
Streptomyces sp. CdTB01
Pathway
scx00900
Terpenoid backbone biosynthesis
scx00997
Biosynthesis of various other secondary metabolites
scx01100
Metabolic pathways
scx01110
Biosynthesis of secondary metabolites
Module
scx_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
scx00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
AS200_41685
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
AS200_41685
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
scx01006
]
AS200_41685
Enzymes [BR:
scx01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
AS200_41685
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
AS200_41685
2.5.1.29 geranylgeranyl diphosphate synthase
AS200_41685
Prenyltransferases [BR:
scx01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
AS200_41685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
ALV39069
UniProt:
A0A0U3QIG3
LinkDB
All DBs
Position
complement(9321985..9323226)
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AA seq
413 aa
AA seq
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MSPTAAQEHRPHGTRRHSAHPTGSDALRAVDADVPGAVRGVLAELLARRLTAAEAVDPLF
ARDLAARVARFTEDGGKFSRSSLVWWGMRACGGDPSMLRPALRIGAALELIQTCALVHDD
VMDGAPLRRGRPSLHAEIADRYAGETSGPRAARLGQASAILAGDLALAWADDVVADTELP
RATAREVRDLWRAMRMEMVAGQYLDIHGEATSARSLSRAIRAACLKSALYSVERPLALGA
ALAGATPTTTRALCSAGRCVGIAFQLRDDLLDVYGDPRDTGKPPGGDIRSGKPTYLAAVA
EARAESAGDRHALAVLRTSLGRADLAEDELAAVREVFEVTGARGTVEAKIDRLVAQGLRH
LDGALLAPHAGNRLRALLRSAAGTPPPQAPDTTPDDVVPVSLSLTTAEEGARR
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgagccccaccgcggcacaggaacaccgcccccacggcactcgacggcacagcgcacat
ccgaccggatcggacgctctgcgcgccgtcgacgcggacgtgccgggcgccgtacgcggt
gtgctcgccgagctgctcgcccggcggctgacggcggccgaagccgtcgatccgctcttc
gcgcgggacctggccgcccgcgtcgcgcgcttcaccgaggacggcggcaagttcagccgc
tccagccttgtgtggtgggggatgcgcgcctgcggcggcgatccgtcgatgctgcggccc
gccctgcgcatcggtgccgccctggagctgatccagacctgcgccctggtccacgacgac
gtgatggacggcgcgcccctgcgccgcggacgcccctcgctgcacgcggagatagcggac
cggtacgcgggcgagacctccggcccgcgcgccgcgcgcctggggcaggcgtccgcgatc
ctggccggcgatctcgccctggcctgggcggacgacgtcgtggcggacaccgagctgccc
cgtgccaccgcccgggaggtacgggacctgtggcgcgccatgcgcatggagatggtcgcc
gggcagtacctcgacatccacggcgaggcgacctcggcacgctcactgtcccgggcgatc
cgcgccgcctgcctcaagagcgccctgtactccgtggagcgcccgctcgccctgggggcc
gcactggcgggagccacgcccaccacgacacgcgccctgtgctcggccggccgctgcgtc
ggcatcgccttccagctgcgcgacgacctcctcgacgtctacggcgacccccgcgacacc
ggcaaacccccgggcggcgacatccgcagcggcaaacccacctacctcgccgccgtcgcc
gaggcgcgggccgagtccgcgggcgaccggcacgccctcgccgtcctgcggacgtccctc
ggccgtgccgacctcgccgaagacgaactggccgccgtgcgcgaggtgttcgaggtcacc
ggggcacgcggcaccgtcgaggccaagatcgaccgactcgtggcccagggcctgcgccac
ctcgacggcgccctgctcgcaccgcatgccggtaaccggctccgcgcgctgctgcgctcc
gcggccggcaccccgccgccgcaggcgcccgacaccaccccggacgacgtcgtccccgta
tccctgtcgctgaccaccgcggaagaaggggcccgccgatga
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