Streptomyces sp. CdTB01: AS200_41760
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Entry
AS200_41760 CDS
T04240
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
scx
Streptomyces sp. CdTB01
Brite
KEGG Orthology (KO) [BR:
scx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scx03021
]
AS200_41760
Transcription machinery [BR:
scx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AS200_41760
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
KORA
MarR_2
HTH_27
HTH_23
MarR
GerE
HTH_Crp_2
DUF7343
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ALV37870
UniProt:
A0A0U3GG42
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All DBs
Position
9336907..9337746
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AA seq
279 aa
AA seq
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MTAALTTEVGTGQLSERVDASRIAPKDARELTRQFLARLAVLEEGTQEYQYARNTLIEMN
ISLVRYAASRFRSRGPQEMEDIVQVGVIGLIKAIDRFEVSREVEFTSFSIPYIVGEIKRF
FRDTSWAVHVPRRLQEARVQLAQATEELSSRLGRTPTVAELSQLMSLSEEEVIEARLASN
GYTSSSLDAAISTSEDGESVLADFIGNEDNALQLVEDFHSLAPLIADLDERDRLILHMRF
VEERTQAEIGKALNISQMHVSRLLSRLLERLRAGLLTVE
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggcgttgaccacggaagtcggcacgggacagctgtcggagcgcgtcgatgcc
tcccgtatcgccccgaaggacgcccgcgagctgacccgccagttcctggcgcggctcgcg
gtccttgaagagggcacgcaggaataccagtacgcgcgcaacacactgatcgagatgaac
atctcgctggtgcgctacgcggcctcccggttccgcagccgcgggccccaggagatggag
gacatcgtccaggtcggcgtgatcggcctgatcaaggcgatcgaccggttcgaggtctcc
cgcgaagtggagttcacctccttctcgatcccctacatcgtcggtgagatcaagcggttc
ttccgcgacacctcctgggccgtccacgtgccccgccgactgcaggaggccagggtccag
ctcgcccaggccaccgaggaactcagcagccgcctggggcgcacgcccaccgtggcggag
ctgtcgcagctgatgagcctgtcggaggaagaggtcatcgaggcccgcctggcctccaac
ggctacacctcctcctcgctggacgccgccatctccaccagcgaggacggcgagagcgtc
ctggccgacttcatcggcaacgaggacaacgcgctccagctggtcgaggacttccactcc
ctcgcacccctgatcgccgacctcgacgaacgcgaccggctgatcctccacatgcgcttc
gtggaggagcgcacgcaggccgagatcggcaaggccctcaacatctcgcagatgcacgtc
tcacggctgctgagccggctgctcgagcggctgcgcgccggcctgctgaccgtggagtga
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