Streptomyces sp. CdTB01: AS200_43690
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Entry
AS200_43690 CDS
T04240
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
scx
Streptomyces sp. CdTB01
Brite
KEGG Orthology (KO) [BR:
scx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scx03021
]
AS200_43690
Transcription machinery [BR:
scx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AS200_43690
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
KORA
MarR_2
HTH_Crp_2
HTH_23
BTAD
HTH_31
MarR
HTH_3
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ALV38174
UniProt:
A0A0U3GGY0
LinkDB
All DBs
Position
9761027..9761869
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AA seq
280 aa
AA seq
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MTTVTAAKTDNVVGLPEVAEPSRVDPKDARQLTRLFLDRLAVLEEGTAEYQYARNTLIEM
NASLVRFAAGRFRSRGPEEMEDIVQVGMIGLIKAIDRFEISREVEFTSFAIPYIVGEIKR
FFRDTTWAVHVPRRLQEARVQLAKATEELSSRLGRTPTVKELSELMSLPEDEVREARLAS
NGYNSSSLDAALSTSADGETVLQDFIGVDDPALELVEDFHALAPMIAALDERDRQLIHMR
FVEELTQGQIGERLGVSQMHVSRLLSRCLARLRDGMLTNR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtgacggcggcgaagacggacaacgtagtcggcttgcccgaggtcgccgag
ccctcccgtgtggatccgaaggacgcccggcagctgacgcggttgttccttgaccggctg
gcggtgctggaggagggcacggccgagtaccagtacgcgcgcaacacgctgatcgagatg
aacgcctccctggtccgtttcgcggcaggccggttccgcagccgcgggccggaggagatg
gaggacatcgtccaggtcggcatgatcggtctgatcaaggccatcgaccggttcgagatc
tcccgggaggtggagttcacctccttcgccattccctacatcgtcggcgagatcaagcgg
ttcttccgcgacacgacctgggccgtgcatgtgccgcgccggctgcaggaggcccgcgtc
cagctcgccaaggcgacggaggaactcagcagccggctgggccgcaccccgacggtgaag
gaactgtcggagctgatgagcctgcccgaagacgaggtccgcgaggcccgcctggcctcc
aacggctacaactcctcctccctggacgctgccctcagcaccagcgcggacggcgaaacc
gtcctgcaggacttcatcggcgtcgacgatccggccctcgaactcgtcgaggacttccac
gccctggctccgatgatcgcggccctggacgaacgcgaccggcagctcatccacatgcgg
ttcgtggaggaactcacccaggggcagatcggtgaacgcctcggcgtctcccagatgcac
gtctcccggctcctctcccgctgcctggcccggctgcgcgacggcatgctcaccaaccgc
tga
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