Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488: SCATT_04920
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Entry
SCATT_04920 CDS
T02095
Name
(GenBank) ECF subfamily RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
scy
Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488
Brite
KEGG Orthology (KO) [BR:
scy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scy03021
]
SCATT_04920
Transcription machinery [BR:
scy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCATT_04920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_30
Sigma70_ECF
Myb_DNA-bind_8
HTH_23
Xre-like-HTH
wHTH-HSP90_Na-assoc
Motif
Other DBs
NCBI-ProteinID:
AEW92863
UniProt:
F8JQX7
LinkDB
All DBs
Position
599468..600187
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AA seq
239 aa
AA seq
DB search
MRARLRAGEPAAFAELFDVYARGVYNHAFRLTANWSTAEDVMATTFMEAWRLRDRIDAEG
GSLRPWLLGIATNTARNQIRSNRSYRRAAVATAAAELPVVDHADEVATHIDDQRRLAAVL
RALGSLRRAEREVVAPCLGEGLDYEAAAKALGIPVGTVASRLSRARKKLRSLTEAEFAQH
GDAATADRHVPSGPVRPAPRTRSVDAAEKVRSRREAGAADRQIPGDRVKTVRPAQEGNR
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcccgactacgggccggggagccggccgcgttcgccgagttgttcgacgtttac
gcccgcggcgtgtacaaccacgctttccgtctgaccgccaactggtcgacggccgaggac
gtcatggccacgaccttcatggaggcgtggcggcttcgcgacaggatcgacgccgagggc
ggttcactgcggccctggctgctgggcatcgccaccaacaccgcacgcaaccagatacgc
agcaaccgcagctaccgccgggcagcggtggccacagcggcggccgaactgcccgttgtg
gaccacgccgacgaggtcgcgacgcacatcgacgaccagcgcaggctggcggcggtcctt
cgggcgctcggatcgttgcgcagggccgagcgggaggtcgtcgccccctgtctgggggaa
gggctcgactacgaggcggcggcgaaggcgctggggatcccggtgggcacagtcgcgtcc
cggctctccagggcccgcaaaaaactccggtccctgacggaggccgagttcgcacagcac
ggcgacgccgcgacggccgaccggcacgtgccaagcggccccgtccggcccgcgccgcgg
acccgaagcgtggacgcagccgaaaaagtccggagcagacgggaagccggggcggccgac
agacagataccaggtgaccgcgtcaagaccgtccggcccgcacaggaaggaaaccgatga
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