Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488: SCATT_16400
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Entry
SCATT_16400 CDS
T02095
Name
(GenBank) hypothetical protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
scy
Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488
Pathway
scy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCATT_16400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scy03019
]
SCATT_16400
03009 Ribosome biogenesis [BR:
scy03009
]
SCATT_16400
Enzymes [BR:
scy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
SCATT_16400
Messenger RNA biogenesis [BR:
scy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SCATT_16400
Ribosome biogenesis [BR:
scy03009
]
Prokaryotic type
rRNA processing factors
SCATT_16400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
AEW94011
UniProt:
G8WNG6
LinkDB
All DBs
Position
complement(1765403..1769071)
Genome browser
AA seq
1222 aa
AA seq
DB search
MSAEGGTSAAPRRRRRAAARPAGPPSAAQETAAEVVTPATPAPAAEPQQAPPSEEAPAPR
TRRRATRKATAPVGPPAVSEEPAAEAPAAEEAPARTRRRATRAAATEETTPQAEEAAAPE
ARTRRRATRKATAPAGPPAVGEEQAAEEPARPEAAQPEPAQAEAPAPRARRTRKRAAAEP
EAAETPAASRRSRKRTADLAEDGSRRLKPGSLAEPVEEPRAAAPAPAEEPRTALADKAAA
EPAAPEPAAEETPRGRRRGARRAVAPAGPPAFAHGTADQPRPAAEPAAEEEAEPAPTGGR
RRRAVRPPTAVFQPPVFTPAAAPEPPAAVRDEEEPEEGASRRRRRRRGPAEEVTVAETAP
AEEESAESAERAEEAEAEHEAEWDEESGEERPSRRRRRGGRRRRRGDAAEAEETAAEHAE
DEEHAAEEGEPEEGEDAEAGEYATGTSTSRRRRRRRRRSGETAVEGEPEADDPERTVVKI
REPRKKAEPSDEVQSIKGSTRLEAKKQRRREGREQGRRRVPIITEAEFLARREAVERVMV
VRENGDRTQIGVLEDGVLVEHFVNKEQATSYVGNVYLGKVQNVLPSMEAAFVDIGKGRNA
VLYAGEVNFEAMGLGGGPRRIESALKSGQSVLVQVTKDPIGHKGARLTSQVSLPGRYLVY
VPEGSMTGISRKLPDTERARLKQILKKIVPENAGVIVRTAAEGASEEELSRDVSRLQAQW
EEIQKNAKNGNAPSLLYGEPDMTVRVVRDIFNEDFSKVIISGDDAWETIHGYVSHVAPDL
TDRLQKWTSEVDVFATYRIDEQLLKALDRKVWLPSGGSLVIDRTEAMVVIDVNTGKFTGQ
GGNLEETVTRNNLEAAEEIVRQLRLRDLGGIIVIDFIDMVLESNRDLVMRRLLECLGRDR
TKHQVAEVTSLGLIQMTRKRVGQGLLESFSETCVHCNGRGVIVHMDQATTAGGGGKRKKK
GKPAPAAVEPAAEELPAEPEVPAVEAEAEEEEWFGSPAEAEAAAVASRSRGRRRAVREPE
PVVEPVVEPAAEPEPQPEPAPAPEPEPEPEPEPVRATRRRAPRKATAPAGSPKTVTEPAA
AEIVLPVAETTPEPAPEPAPTPAPEARPVRPRRAARKASAPAGPPPASAGDAAVVVISTP
AREPEPEPEPEAEAPKKRATRKTAAKKTTTAKKAVAKKTTTAAKKTTTAKKAAAKKTTTA
KKTTAAKKTTAKKTTTAPETTP
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgccgaaggcggtacgtccgccgcgccgcgtcgcaggcgccgggcggccgcccgc
ccggcgggtccgccgtccgccgcacaggagacggccgccgaggtcgtcacccccgcgacc
ccggctccggcggccgagccgcagcaggccccgccgtccgaggaggcccccgcgccgcgt
acccggcggcgtgcgacgcgcaaggcgaccgcgcccgtcggcccgccggccgtgagcgag
gagccggccgccgaggccccggccgccgaggaggcgccggcccgtacccgccgccgcgcc
acccgcgccgccgccaccgaggagaccaccccgcaggccgaagaggcggcggcccccgag
gcgcgcacccggcgccgtgcgacgcgcaaggcgaccgcccccgcgggccctccggccgtc
ggcgaggagcaggccgccgaggagcccgcgcggcccgaggcggcgcagcccgagcccgcc
caggccgaagccccggccccgcgcgcccgccgtacccgcaagcgcgccgccgccgagccg
gaggccgccgaaaccccggcggcgtcccgccgttcccgcaagcgcaccgccgacctggcc
gaggacgggtcgcggcggctgaagcccggttcgctcgccgagccggtcgaggagccccgc
gccgccgccccggccccggccgaggagccgcgcaccgccctggccgacaaggccgccgcc
gagcccgccgccccggagcccgccgccgaggagacgccgcgcggacgccgccgtggcgcc
cgccgggcggtcgccccggccggcccgccggccttcgcccacggcaccgccgaccagccg
cggcccgccgccgagcccgccgccgaggaggaggccgaaccggccccgaccggtggccgc
cgccgccgcgccgtccgtccgccgacggccgtcttccagccgccggtcttcaccccggcc
gccgcccccgagcccccggccgccgtccgcgacgaggaggagcccgaggagggcgcctcg
cgccgccgtcgtcgccgccgcggcccggccgaggaggtcacggtcgccgagaccgccccg
gccgaggaggagagcgccgaatccgccgagcgcgcggaggaggccgaggccgagcacgag
gccgaatgggacgaggagtcgggcgaggagcgcccctcccgccgccgccgtcggggcggc
cgtcgccgtcgccgcggtgacgccgccgaggccgaggagaccgcggccgagcacgccgag
gacgaggaacacgccgccgaggagggcgagcccgaggagggcgaggacgccgaggccggc
gagtacgccaccggcaccagcaccagccgccgtcgccgtcgccgccgtcggcgcagcggc
gagaccgccgtggagggcgagcccgaggccgacgaccccgagcgcaccgtcgtcaagatc
cgcgagccgcgcaagaaggccgaaccctccgacgaggtccagtccatcaagggctcgacc
cggctggaggccaagaagcagcgccgccgcgagggccgggagcagggccgccgccgggtg
ccgatcatcaccgaggccgagttcctggcccgccgcgaggccgtcgaacgggtgatggtg
gtccgcgagaacggcgaccgcacccagatcggcgtcctggaggacggcgtcctggtcgag
cacttcgtcaacaaggagcaggccacctcctacgtcggcaacgtctacctcggcaaggtg
cagaacgtcctgccgtcgatggaggccgccttcgtcgacatcggcaagggccgcaacgcc
gtgctctacgccggtgaggtcaacttcgaggcgatgggcctcggcggtggcccgcgccgc
atcgagtccgcgctcaagtccggccagtcggtgctggtgcaggtcaccaaggacccgatc
ggccacaagggcgcccggctgaccagccaggtctccctccccggccgctacctggtctac
gtgcccgagggctcgatgaccggcatcagccgtaagctgcccgacaccgaacgggcccgg
ctcaagcagatcctcaagaagatcgtcccggagaacgcgggcgtgatcgtgcgcaccgcc
gccgagggcgccagcgaggaagagctgtccagggacgtctcccggctgcaggcgcagtgg
gaggagatccagaagaacgcgaagaacggcaacgcgcccagcctgctgtacggcgagccg
gacatgaccgtccgggtggtccgcgacatcttcaacgaggacttctccaaggtcatcatc
agcggcgacgacgcctgggagaccatccacggatacgtctcgcacgtcgcgcccgacctg
accgaccggctccagaagtggacctcggaggtggacgtcttcgccacctaccggatcgac
gagcagctgctgaaggcgctggaccgcaaggtctggctgccgtccggcggttcgctggtg
atcgaccgcaccgaggcgatggtcgtcatcgacgtcaacaccggcaagttcaccggccag
ggcggcaacctggaggagacggtcaccaggaacaacctggaggcggccgaggagatcgtg
cgccagctgcgcctgcgcgacctcggcggcatcatcgtgatcgacttcatcgacatggtg
ctggagtccaaccgggacctggtcatgcgccgcctgctggagtgcctgggccgcgaccgc
accaagcaccaggtggccgaggtcacctcgctgggcctgatccagatgacccgcaagcgg
gtcggccagggcctgctggagtcgttctccgagacctgcgtgcactgcaacggccgtggc
gtcatcgtccacatggaccaggcgaccaccgccggtggcggcggcaagcggaagaagaag
ggcaagccggccccggccgccgtcgagccggccgccgaggagctgcccgccgaacccgag
gtcccggccgtggaggccgaggccgaggaggaggagtggttcggcagtccggccgaggcg
gaggccgccgcggtggcctcccgctcgcgcggccggcgccgtgcggtacgggaacccgag
ccggtcgtcgaaccggtcgtcgaaccggccgccgagcctgagccgcagccggaaccggcg
cccgcgcctgaaccggagccggaaccggaaccggagccggtacgtgcgacccggcggcgc
gccccgcgcaaggcgacggccccggcggggtcgccgaagaccgtcaccgaaccggccgcg
gccgagatcgtcctgccggtcgccgagaccacgcccgaacccgccccggaaccggctccg
acgccggcccccgaggcccgcccggtgcgcccgcgccgtgccgcccgcaaggcatccgcc
ccggccggccccccgccggcctcggccggtgacgccgcggtggtggtcatctccaccccg
gcgcgtgagccggaaccggagccggagccggaggccgaggcgcccaagaagcgcgccacc
cgcaagacggcggccaagaagacgaccaccgccaagaaggcagtggccaagaagacgacc
acggccgcgaagaagacaaccaccgccaagaaggcggcggccaagaagacgacgacggcc
aagaagacgacggcggctaagaagaccaccgccaagaagacgacgaccgcgccggaaacc
accccgtaa
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