Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488: SCATT_24290
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Entry
SCATT_24290 CDS
T02095
Name
(GenBank) hypothetical protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
scy
Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488
Pathway
scy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCATT_24290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scy03019
]
SCATT_24290
03110 Chaperones and folding catalysts [BR:
scy03110
]
SCATT_24290
03029 Mitochondrial biogenesis [BR:
scy03029
]
SCATT_24290
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scy04147
]
SCATT_24290
Enzymes [BR:
scy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SCATT_24290
Messenger RNA biogenesis [BR:
scy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SCATT_24290
Chaperones and folding catalysts [BR:
scy03110
]
Heat shock proteins
HSP60 / Chaperonin
SCATT_24290
Mitochondrial biogenesis [BR:
scy03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SCATT_24290
Exosome [BR:
scy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SCATT_24290
Exosomal proteins of other body fluids (saliva and urine)
SCATT_24290
Exosomal proteins of breast cancer cells
SCATT_24290
Exosomal proteins of colorectal cancer cells
SCATT_24290
Exosomal proteins of bladder cancer cells
SCATT_24290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF4844
CbiA
Motif
Other DBs
NCBI-ProteinID:
AEW94800
UniProt:
G8WS40
LinkDB
All DBs
Position
complement(2583646..2585226)
Genome browser
AA seq
526 aa
AA seq
DB search
MNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAK
KTDDVAGDGTTTATVLAQALVREGLRNVAAGANPMALKRGIEKAVEAVSAQLLEQAKDVE
TKEQIASTASISAADTQIGELIAEAMDKVGKEGVITVEESNTFGLELELTEGMRFDKGYI
SAYFATDMERMEAVLEDPYILIVNSKVSAVKDLLPLLEKVMQSGKPLLIIAEDVEGEALS
TLVVNKIRGTFKSVAVKAPGFGDRRKAMLGDIAILTGGTVISEEVGLKLENAGLDLLGRA
RKVVITKDETTIVDGAGDSDQVAGRVNQIRAEIEQSDSDYDREKLQERLAKLAGGVAVIK
AGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQASSVFEKLELELAGDEATG
AAIVKTALEAPLKQIAVNAGLEGGVVAEKVRNLPTGHGLNAATGEYVDLVGEGIIDPAKV
TRSALQNAASIAGLFLTTEAVVADKPEKAAAGADAAAAGMGGGMDF
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagctcgccgacgccgtaaaggtgaccctcggccccaagggccgcaacgtcgtc
cttgagaagaagtggggcgcccccacgatcaccaacgatggtgtctccatcgccaaggag
atcgagctcgaagacccctacgagaagatcggcgccgagctggtcaaggaggtcgcgaag
aagacggacgacgtcgccggtgacggcacgacgaccgcgaccgtcctggcccaggcgctg
gtccgcgagggtctgcgcaacgtcgccgccggcgccaacccgatggccctcaagcgtggc
atcgagaaggccgtcgaggccgtctccgcccagctgctggagcaggccaaggacgtggag
accaaggagcagatcgcctccaccgcctccatctccgccgccgacacccagatcggcgag
ctgatcgccgaggccatggacaaggtcggcaaggaaggcgtcatcaccgtcgaggagtcc
aacaccttcggcctggagctcgagctcaccgagggtatgcgcttcgacaagggctacatc
tcggcgtacttcgccaccgacatggagcggatggaggccgtcctcgaggacccctacatc
ctgatcgtcaactccaaggtctccgcggtgaaggacctcctcccgctgctggagaaggtc
atgcagtcgggcaagccgctgctgatcatcgctgaggacgtcgagggcgaggccctgtcc
accctggtggtcaacaagatccgcggcaccttcaagtccgtcgccgtcaaggccccgggg
ttcggcgaccgccgcaaggccatgctcggcgacatcgccatcctcaccggtggcacggtc
atctccgaggaggtcggcctcaagctggagaacgccggcctggacctgctcggccgcgcc
cgcaaggtcgtcatcaccaaggacgagaccaccatcgtcgacggtgccggtgacagcgac
caggtcgccggccgggtcaaccagatccgcgccgagatcgagcagtcggactccgactac
gaccgcgagaagctccaggagcgcctcgccaagctggccggcggcgtggccgtcatcaag
gccggtgccgccaccgaggtggagctcaaggagcgcaagcaccgcatcgaggacgcggtg
cgcaacgccaaggccgccgtcgaggagggcatcgtcgccggtggtggcgtggccctgctc
caggcgtccagcgtcttcgagaagctggagctggagctggccggcgacgaggccaccggt
gccgcgatcgtgaagaccgcgctggaggccccgctcaagcagatcgccgtcaacgccggc
ctcgagggcggcgtcgtcgcggagaaggtgcgcaacctgcccaccggccacggcctcaac
gccgccaccggtgagtacgtcgacctggtcggcgagggcatcatcgacccggccaaggtg
acccgctcggcgctgcagaacgccgcgtccatcgcgggcctgttcctgaccaccgaggcc
gtcgtggccgacaagccggagaaggccgccgccggtgcggacgccgctgccgccggcatg
ggcggtggcatggacttctga
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