Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488: SCATT_29600
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Entry
SCATT_29600 CDS
T02095
Name
(GenBank) RNA polymerase sigma factor, sigma F
KO
K03090
RNA polymerase sigma-B factor
Organism
scy
Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488
Brite
KEGG Orthology (KO) [BR:
scy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scy03021
]
SCATT_29600
Transcription machinery [BR:
scy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCATT_29600
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_24
DUF7343
GerE
HTH_AsnC-type
NirdL-like_HTH
MarR
HTH_3
Sigma70_ECF
MarR_2
DUF4423
HTH_5
Motif
Other DBs
NCBI-ProteinID:
AEW95331
UniProt:
F8JQ64
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All DBs
Position
3117439..3118587
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AA seq
382 aa
AA seq
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MPLPARTAPAPLADSAGRPVPEVDPAPAPAPEPAEPVAPAGEGPEEHGDHGAVGEAETSV
RESAAARAPSPAGDATACAPAPGIPAHAVPSASGAPDAAAPAGPGESAEPPQEGAPGART
GRSRPPRSARAADARALTQVLFQQLSGLEPGTPEHARVRAALIEINLPLVRYAAARFRSR
NEPMEDVVQVGTIGLINAIDRFDPDRGVQFPTFAMPTVVGEIKRYFRDNVRTVHVPRRLH
ELWVQVSGAIEDLTVLHGRSPTTAEIAGRLGLSEEEVLACLEAGRAYHATSLEAAQEGDG
APGLLDRLGYEDPELTGVEHRDLVRHLLVQLPERERRILLLRYFGNLTQSQISAELGVSQ
MHVSRLLSRSFARLRSANQLEP
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
gtgccgttgccggcccggactgcacccgcaccgctcgccgactccgccgggcggccggtc
ccggaggtggaccccgccccggcgccggccccggagcccgccgagcccgtggccccggcc
ggcgaaggccccgaggagcacggagaccacggcgccgtcggagaggcggagacctcggtg
cgggagagcgcggcggcgcgggccccgagcccggccggtgacgcgaccgcgtgcgctccg
gcgcccgggatcccggcgcacgccgttccgtccgcctccggcgcccctgacgccgccgcg
ccggccgggcccggggagtccgcggagccgccgcaggagggcgcccccggcgcgcgtacg
gggcgttcgcgccctccgcgcagtgcccgggcggctgacgcgcgcgcgctcacccaggtg
ctcttccagcagttgtccgggctggagccgggcaccccggagcacgcccgggtgcgggcc
gcgctgatcgagatcaacctgccgctggtgcggtacgccgcggcccgcttccgcagccgc
aacgagccgatggaggacgtggtccaggtcggcaccatcgggctgatcaacgccatcgac
cgcttcgacccggaccgcggggtgcagttcccgacgttcgccatgccgaccgtggtcggg
gagatcaaacgttacttcagggacaacgtgcgcaccgtccacgtaccgcggcggctgcac
gagctgtgggtgcaggtgagcggggccatcgaggacctgaccgtgctgcacgggcggtcg
ccgacgaccgccgagatcgccgggcgcctcgggctctccgaggaggaggtgctcgcctgc
ctggaggccggccgggcgtatcacgccacctcgctggaggccgcgcaggagggcgacggc
gcccccggcctgctggaccggctcggctacgaggaccccgagctgaccggggtcgaacac
cgcgatctggtgcgccatctgctggtgcagctgccggaacgcgagcggcggatcctgctg
ctgcgctacttcggcaacttgacgcagtcgcagatcagtgccgagctgggggtttcgcag
atgcacgtctcccggctactttcacggagcttcgcccgactgcgatccgcaaaccagctc
gaaccgtag
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