Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488: SCATT_36510
Help
Entry
SCATT_36510 CDS
T02095
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
scy
Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488
Brite
KEGG Orthology (KO) [BR:
scy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scy03021
]
SCATT_36510
Transcription machinery [BR:
scy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCATT_36510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
HTH_16
HTH_23
GerE
Motif
Other DBs
NCBI-ProteinID:
AEW96022
UniProt:
G8X031
LinkDB
All DBs
Position
3925219..3926358
Genome browser
AA seq
379 aa
AA seq
DB search
MVAGLPASEAKGAGESEADGDGERMRGMTAASTSASGAATTSGRAAIARATAAYASAGAG
APARAEGAPRPGPAAEYEYAPRQSAGRPAAASYPGGQGVRAVAAAPSGATLHATGVQTTT
VLGAVARPAHPVPAAAQAPGRGGQPLRSGPPYNASMHKSGRGATDRGATMHHGPVRDDET
SAIGALVRRAVEGDEQATHDLLAHVHPLALRYCRTRLSRLPGDARHFVDDLAQEVCLAVL
CALPRYRDQGRPFEAFVFAIASHKVADLQRSAMRGPGSTAVPSEDLPEKPDDSLGPEERA
LLSSDAEWARELLANLPATQRELVLLRVAVGLTAEETGQVLGMSPGAVRVAQHRALSRLR
ALAAQAHGLPADDARGLSA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
gtggtggcgggcttgccggcctcggaggccaagggcgcgggtgaatcggaggccgacggt
gacggggagcggatgcgtgggatgacggcggcgagcacatccgcgtccggcgcggccacc
acgtccgggcgtgcggcgatcgcccgggccacggcggcgtacgcctccgccggggccggc
gcgccggcccgggccgagggcgctccgcgtccggggccggccgccgagtacgagtacgcg
ccgcgccagtccgccggtcgtccggccgccgcctcctacccgggcggccagggcgtgcgc
gcggtcgcggcggcgccgtccggtgcgacgctgcacgccacgggggtgcagaccaccacc
gtgctcggtgccgtggcgcggccggcccacccggtgccggccgcggcgcaggccccggga
cgtggcggacagccgctgcggagtggccctccgtataacgcttcgatgcacaagtcggga
cgcggtgcgacggaccgcggggcgaccatgcaccatggaccggtgcgtgacgacgagacc
tcggccatcggtgccctcgtacgccgcgctgtggagggcgacgaacaggccacgcacgat
ctgctggcccacgtccacccgctggccctgcggtactgccggacgaggttgtcgcggctg
ccgggtgacgcccgccactttgtggacgacctcgcgcaggaggtctgcctggcggtgttg
tgcgcgctgccgcgctaccgcgaccaggggcgcccgttcgaggcgttcgtgttcgccatc
gcttcccacaaggtggccgacctgcagcgttcggcgatgcgggggcccggttcgaccgcc
gttccgtcggaggatctgccggagaagccggacgactcgctcgggccggaggaacgagcg
ctgctgagcagcgacgccgaatgggcgcgggaactgctggcgaacctgccggccacccag
cgcgagctggtgctgctgcgggtcgcggtggggctgacggcggaggagaccggccaggtg
ctggggatgtccccgggcgcggtacgggtggcccagcaccgcgcgttgagccggttgcgg
gcgctggccgcccaggcgcacgggctgcccgcggacgacgcgcgggggctgagcgcctag
DBGET
integrated database retrieval system
