Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488: SCATT_44410
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Entry
SCATT_44410 CDS
T02095
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
scy
Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488
Pathway
scy02020
Two-component system
scy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
scy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SCATT_44410
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SCATT_44410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scy03021
]
SCATT_44410
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
scy02035
]
SCATT_44410
Transcription machinery [BR:
scy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCATT_44410
Bacterial motility proteins [BR:
scy02035
]
Flagellar system
Flagellar assembly proteins
Stator
SCATT_44410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
HTH_23
CENP-B_N
Sigma70_ECF
CT_C_D
HTH_31
GerE
Motif
Other DBs
NCBI-ProteinID:
AEW96812
UniProt:
F8JTP6
LinkDB
All DBs
Position
4768879..4769724
Genome browser
AA seq
281 aa
AA seq
DB search
MPQHTSGPDRSAAATDRRASPHARNAAPTALDELWRTYKATGEPRLREQLILHYSPLVKY
VAGRVSVGLPPNVEQADFVSSGVFGLIDAIEKFEPERSIKFETYAITRIRGAMIDELRAL
DWIPRSVRQKARAVERAYATLEAKYHRTPSEAEVAEEMDITVEELHSIFSQLSLANVVAL
EELLHVGGENGDRLSLVDTLEDRAADNPVEVAEDRELRRLLARAVATLPEREKTVVTLYY
YEGLTLAEIGQVLGVTESRVSQIHTKSVLQLRAKLADVGRG
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcacacctccgggcctgaccgctcggcggcggcgaccgaccgccgcgcctct
ccgcacgcccggaacgccgccccgaccgccctcgacgaactgtggcgcacctacaaggcc
accggggaaccccgcctgcgcgagcagctgatcctgcactactcgcccctggtcaaatac
gtcgccgggcgggtcagcgtcggcctgccgcccaacgtcgaacaggccgacttcgtctcc
tccggggtcttcggcctgatcgacgccatcgagaagttcgagccggaacgctcgatcaag
ttcgagacctacgccatcacccggatccgcggcgccatgatcgacgagctgcgggcgctc
gactggatcccgcgttcggtacgccagaaggcccgggccgtggaacgcgcctacgccacg
ctggaggccaagtaccaccgcaccccctccgaggccgaggtggccgaggagatggacatc
accgtcgaggaactccactcgatcttcagccagctctccctcgccaacgtggtcgccctg
gaggaactgctgcacgtcggcggcgagaacggcgaccggctcagcctcgtcgacaccctg
gaggaccgcgccgccgacaaccccgtcgaggtcgccgaggaccgggaactgcgccggctc
ctcgcccgcgccgtggccaccctcccggagcgcgagaagaccgtcgtcaccctctactac
tacgaggggctcaccctggccgagatcggccaggtgctcggggtcaccgagagccgggtc
agccagatccacaccaaatcggtgctccagctgcgggccaagctcgccgacgtgggacgc
ggctga
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