Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488: SCATT_45900
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Entry
SCATT_45900 CDS
T02095
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
scy
Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488
Pathway
scy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
scy00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SCATT_45900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scy03021
]
SCATT_45900
Transcription machinery [BR:
scy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCATT_45900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
ELLD
Sigma70_r1_1
CDC27
Motif
Other DBs
NCBI-ProteinID:
AEW96961
UniProt:
G8X3B0
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All DBs
Position
4951402..4952898
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AA seq
498 aa
AA seq
DB search
MALIERGKAQGQIAGDDVRRAFEADQIPATQWKNVLRSLNQVLDEEGVTLMVSAAEAPKR
TRKSVAAKSPAKRAAAKPVATTTVTKRTAAAKTVAAPAATAEVPSDAGEETAPAAKKTAP
AKKTVAKKAAAKKTAAKKTVAKKGDDELLVEGEDLLEDVAPGKGGEPGPDQPESEGFVLS
DEDEDDAPAQQVAAAGATADPVKDYLKQIGKVPLLNAEQEVELAKRIEAGLFAEDKLSSA
DKLAPKLQRELEIIAEDGRRAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIR
AVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDL
GREPTPEELAKELDMTPEKVIEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAVVPADA
VSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGVTRERIRQIESKT
MSKLRHPSRSQVLRDYLD
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcatcgagcggggtaaggctcagggccagatcgcaggcgacgacgtacgtcgg
gccttcgaggcggaccagattccggcaacccagtggaagaacgtcctgcgcagcctcaac
caggtcctcgacgaggagggtgtgacgctgatggtcagtgccgcggaggcgcccaagcgc
acccgaaagagcgtcgcagccaagagccccgccaagcgtgccgccgccaagcccgtcgcc
accaccacggtgaccaagcggaccgcggcggccaagaccgtcgccgcgccggccgccacc
gccgaggtcccgtcggacgcgggcgaggagaccgcccccgccgccaagaagaccgctccc
gccaagaagaccgtggccaagaaggcggcggccaagaagaccgccgccaagaagaccgtg
gcgaagaagggcgacgacgagctgctcgtcgagggcgaggacttgctggaggacgtggcg
cccggcaagggcggcgagcccgggccggaccagccggagtccgagggcttcgtgctctcc
gacgaggacgaggacgacgccccggcgcagcaggtggccgccgccggagccaccgccgac
ccggtcaaggactacctcaagcagatcggcaaggtccccctgctcaacgccgagcaggag
gtcgagctggccaagcgcatcgaggccggtctcttcgccgaggacaagctctcctccgcc
gacaagctggcccccaagctccagcgcgagctggagatcatcgccgaggacggccgccgc
gccaagaaccacctgctggaggccaacctccgactggtggtctcgctggccaagcgctac
accggccgcggcatgctcttcctggacctgatccaggagggcaacctgggcctgatccgc
gcggtggagaagttcgactacaccaagggctacaagttctccacgtacgccacctggtgg
atccggcaggcgatcacccgtgccatggccgaccaggcgcgcaccatccgcatcccggtg
cacatggtcgaggtcatcaacaagctcgcccgtgtgcagcgccagatgctccaggacctg
ggccgcgagcccaccccggaggagctggccaaggagctcgacatgaccccggagaaggtt
atcgaggtccagaagtacggccgcgagcccatctcgctgcacaccccgctcggcgaggac
ggcgacagcgagttcggtgacctcatcgaggactccgaggccgtggtcccggccgacgcg
gtcagcttcaccctgttgcaggagcagctccactccgtcctggacaccctctccgagcgc
gaggcgggcgtggtctccatgcgcttcggcctcaccgacggccagcccaagacgctggac
gagatcggcaaggtctacggggtcacccgggagcggatccggcagatcgagtccaagacc
atgtccaagctgcgccacccgtcccggtcccaggtcctccgcgactacctggactga
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