Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488: SCATT_51770
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Entry
SCATT_51770 CDS
T02095
Name
(GenBank) DSH domain protein
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
scy
Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488
Brite
KEGG Orthology (KO) [BR:
scy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scy03019
]
SCATT_51770
Enzymes [BR:
scy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SCATT_51770
Messenger RNA biogenesis [BR:
scy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SCATT_51770
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
CTK3_C
nSTAND_NTPase5
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEW97548
UniProt:
F8K2N8
LinkDB
All DBs
Position
5596430..5599273
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AA seq
947 aa
AA seq
DB search
MTDEILSPAERYAAARRRAAEQATALGTFRELYDFALDPFQIEACQAMEAGKGVLVAAPT
GSGKTIVGEFAVHLALRAGRKCFYTTPIKALSNQKYADLVKRYGPGKVGLLTGDNSVNAD
APVVVMTTEVLRNMLYAGSQALSGLGYVVMDEVHYLSDRFRGAVWEEVIIHLPESVTLVS
LSATVSNAEEFGDWLDTVRGDTEVIVSEHRPVPLWQHVLAGRRMYDLFEEKSAAPDAAVR
PGKLDVNPDLLRLARTQNTLGYNPRDRRRRGYEADRERERRQRNRIWTPGRPEVIERLDA
EGLLPAITFIFSRAGCEAAVQQCLHAGLRLNDDEARAKVRAIAEERTAAIADEDLHVLGY
FEWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLVKAVFATETLALGINMPARSVVLEKL
VKWNGETHADITPGEYTQLTGRAGRRGIDVEGHAVVLWQRGLDPVALAGLAGTRTYPLRS
SFRPSYNMAVNLVGQFGRHRSRELLETSFAQFQADRSVVGITRQVQRNEEGLAGYREGMT
CHLGDFEEYGRLRRELKDRESALSRQGAAQHRAAAADALEKLKPGDIIHVPAGKFAGLAL
VLDPGIPAGRSPGRPHQRYLAEDGPRPLVLTAERQVKRLAPMDFPVPVEALERMRIPRGF
NPRSPQSRRDLASAMRSKAGTAGIHAPGRRRKQRSAAADDAELARLRTEIRAHPCHGCDE
REDHARWAERYWRLQRDTQALQRRIEGRTNTIARTFDRICGLLTELGYLDGDTVTEHGRR
LARLYGELDLLASECLREGVWNGLGPAELAACASALVYESRSADDMLAPKLPGGNARHAL
GEMVRIWGRLDALEDEHRIKQSEGVGQREPDLGFAWAAHRWASGHGLDAVLRDADMPAGD
FVRWTKQLIDVLGQIAEAAPQDSPVRANARKAVDKLLRGVVAYSSLG
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgagatcctctcaccagccgagcgctacgccgccgcccgccgccgggcggcc
gagcaggccaccgccctcgggaccttccgtgagctgtacgacttcgcactggatccgttc
cagatcgaggcgtgccaggccatggaggcgggcaagggcgtactggtcgccgccccgacc
ggttccggcaagaccatcgtcggcgaattcgccgtccacctcgcgctgcgcgccggccgc
aagtgcttctacaccacgccgatcaaggcgctgtccaaccagaaatacgccgacctggtc
aaacgctacggacccggcaaggtcggtctgctcaccggggacaacagcgtcaacgccgat
gccccggtggtggtgatgaccaccgaggtcctgcgcaacatgctgtacgcgggctcccag
gcgctctccggcctcggctacgtggtcatggacgaggtgcactacctctccgaccggttc
cgcggcgcggtctgggaggaggtcatcatccacctgccggagtcggtgaccctggtctcg
ctgtcggccaccgtctccaacgccgaggagttcggcgactggctggacacggtgcgcggc
gacaccgaggtgatcgtctccgagcaccgcccggtgccgctgtggcagcacgtgctcgcc
gggcggcggatgtacgacctgttcgaggagaagtcggccgccccggacgccgccgtgcgc
cccggcaagctggacgtcaaccccgacctgctgcggttggcccgcacccagaacacgctc
ggctacaacccccgggaccgccgccgccgcggctacgaggccgaccgggagcgcgaacgc
aggcagcgcaaccggatctggaccccgggccgccccgaggtgatcgagcggctggacgcc
gaggggctgctgccggcgatcaccttcattttcagccgggccggctgcgaggccgcggtg
cagcagtgcctccacgccggcctgcggctcaacgacgacgaggcccgggccaaggtgcgg
gccatcgccgaggagcgcaccgccgccatcgccgacgaggacctgcacgtcctggggtac
ttcgagtggctggagggactggagcggggcatcgccgcccaccacgccgggatgctcccc
accttcaaggaggtcgtcgaggagctcttcgtccgcggcctggtcaaggcggtcttcgcc
accgagacgctggcgctgggcatcaacatgccggcccgctcggtggtgctggagaagctc
gtcaagtggaacggcgagacccacgccgacatcaccccgggcgagtacacccagctcacc
gggagggccgggcgccgcggcatcgacgtcgagggccacgcggtggtgctgtggcagcgc
ggcctcgacccggtcgcgctggccgggctggccggcacccgcacctatccgctgcgctcc
tcgttccggccgtcgtacaacatggcggtcaacctggtcggtcagttcggccggcaccgc
tcgcgcgagctgctggagacctccttcgcccagttccaggcggaccgttcggtggtcggc
atcacccgccaggtgcagcgcaacgaggaggggctggccggctaccgcgaggggatgacc
tgccacctcggcgacttcgaggagtacgggcggctgcgccgggagctgaaggaccgcgag
tccgcactgtccaggcagggcgccgcgcagcaccgggccgccgccgccgacgcgctggag
aagctcaagccgggcgacatcatccacgtgcccgccggcaagttcgccggcctcgccctc
gtcctcgacccgggcatacccgccggccgcagccccggccgcccgcaccagcgttacctg
gccgaggacggtccgcgcccgctggtgctcaccgcggaacgccaggtcaagcggctggcg
ccgatggacttcccggtgccggtggaggcgctggagcggatgcggatcccgcgcggcttc
aacccgcgcagcccgcagtcccgccgcgacctcgcctccgcgatgcgttccaaggccggc
accgccgggatccacgccccggggcgccgtcgcaagcagcgctcggccgccgccgacgac
gccgaactggcccggctgcgcaccgagatccgcgcccatccctgccacggctgcgacgag
cgcgaggaccacgcccgctgggccgaacgctactggcggctccagcgcgacacccaggcg
ctccagcgccgcatcgagggccgtaccaacaccatcgcccgcaccttcgaccggatctgc
ggcctcctgaccgaactgggctacctcgacggcgacaccgtcaccgagcacggccgccgc
ctcgcccgcctctacggcgaactggacctgctggccagcgaatgcctgcgggaaggcgtc
tggaacggcctgggcccggccgaactggccgcctgcgcctcggcgttggtctacgagtcc
cggtccgccgacgacatgctggcgcccaagctgcccggcggcaacgcccgtcacgcgctc
ggcgagatggtccgcatctgggggcggctggacgccctggaggacgagcaccgcatcaag
cagtccgagggcgtcggccagcgcgagcccgacctgggcttcgcctgggccgcccaccgc
tgggcctccggccacggcctggacgcggtgctgcgcgacgccgacatgccggccggcgac
ttcgtccgctggaccaagcaactgatcgacgtgctcggccagatcgccgaggccgcgccg
caggacagcccggtgcgtgccaatgcccgcaaggcggtggacaagctgctgcgcggtgtg
gtggcctactcgtcgctgggctga
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