Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488: SCATT_p09950
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Entry
SCATT_p09950 CDS
T02095
Name
(GenBank) RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
scy
Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488
Brite
KEGG Orthology (KO) [BR:
scy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scy03021
]
SCATT_p09950
Transcription machinery [BR:
scy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCATT_p09950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
GerE
HTH_Crp_2
HTH_3
MarR_2
HTH_10
HTH_24
HTH_37
DUF7343
HTH_31
MarR
Motif
Other DBs
NCBI-ProteinID:
AEW99188
UniProt:
F8JN62
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All DBs
Position
pSCATT:complement(985181..986080)
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AA seq
299 aa
AA seq
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MSVQLTEEVTTPVGGDEADDAGLEAAGKQGFDERLDAALLDGAASAAEVRQISKVMFARL
AVLEEGTEEYQYVRNTLIELNMALVRFAAKRFGNRAEQMEDILQVGTIGLIKAVDRFDPD
YGVEFVTFALPTIIGEMKRFFRDTSWSVRVPRRLQELRIDLAKATDALAAELDRAPTTAE
LAARLDIGEEEVVEAQVAANAYTASSIDAQAGDDEDDGTAWADRLGAEDPALEGVENLTA
LAPLVAELPERERAILAMRFSADMTQKQIGERLGISQMHISRLLSRTLGKLREGLLAES
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtccagctcacggaagaggtcaccacgccggtcggcggggacgaggcggatgac
gcggggctggaggcagccgggaagcaggggttcgacgaacggctggacgccgcgctgctg
gacggcgccgcgagcgcggccgaggtgcgccagatctccaaggtgatgttcgcgcggctg
gcggtgctggaggagggcaccgaggagtaccagtacgtacgcaacacgctcatcgaactc
aacatggctctggtgcgtttcgccgccaagcgcttcggcaaccgggccgagcagatggag
gacatcctccaggtgggcacgatcggtctgatcaaggcggtggaccggttcgaccccgac
tacggtgtggagttcgtcaccttcgcgctgccgacgatcatcggggagatgaagaggttc
ttccgggacaccagttggtcggtgcgggtgccgcggcgcctgcaggagctgcggatcgac
ctggccaaggcgaccgacgcgctcgccgccgagctcgaccgcgccccgaccaccgcggag
ctggcggcgcggctggacatcggcgaggaagaggtggtcgaggcgcaggtcgccgccaac
gcctacaccgcctcctcgatcgacgcgcaggcgggcgacgacgaggacgacggcaccgcg
tgggccgaccgcctcggcgccgaggacccggcgctggagggcgtggagaacctcaccgcg
ctcgccccgctcgtcgccgagttgccggagcgtgaacgcgccatcctggccatgcggttc
agcgccgacatgacgcagaagcagatcggcgagcggctgggcatctcgcagatgcacatc
tcgcggctgctgtcgcggacgttgggcaagctgcgggagggtctgctcgcggagagctga
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