Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488: SCATT_p12720
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Entry
SCATT_p12720 CDS
T02095
Name
(GenBank) RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
scy
Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488
Brite
KEGG Orthology (KO) [BR:
scy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scy03021
]
SCATT_p12720
Transcription machinery [BR:
scy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCATT_p12720
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_31
MarR_2
HTH_3
HTH_37
Sigma70_ECF
HTH_Crp_2
HTH_24
HTH_38
KORA
GerE
Motif
Other DBs
NCBI-ProteinID:
AEW99465
UniProt:
F8JM12
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All DBs
Position
pSCATT:complement(1275476..1276315)
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AA seq
279 aa
AA seq
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MPAQPQAQVAATTRSAREPARDAGTAEIREMSRVMFARLATLEEGTEEYQYVRNSLIELN
TALVRFAARRFSQRAEQMDDILQVGLIGLIKAVDRYDPGYGTEFVSFALPTITGEMKRFF
RDTSWAVRVPRRLQELRIELAKATDVLAVELDRDPTAAELAAHLGIGEDEVREARTALGA
YNASSLDARTRDEDADEGSAWSHHLGGDDPALERVENLTALRPLIARLPERERAILALRF
GSGLTQREIGRRLGLSQMHISRLLTRTLATLREQLLAEP
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgccggcccagccgcaggcacaggtcgccgccaccacgaggagcgcacgggaaccggcg
cgggacgccggtacggcggagatccgggagatgtcccgggtgatgttcgcccgtctggcg
acgctggaggaaggcaccgaggagtaccagtacgtccgaaactcgctgatcgagctgaac
accgcgctggtacggttcgcggccaggcggttctcccagcgggccgagcagatggacgac
atcctgcaagtggggctgatcggcctgatcaaggcggtggaccgctacgaccccggctac
ggcaccgagttcgtcagcttcgcgctgcccaccatcaccggggagatgaagcggttcttc
cgtgacaccagctgggcggtacgcgtcccgcgccggctccaggagctgcggatcgagctg
gcgaaggccaccgacgtcctcgcggtggaactggaccgcgaccccacggccgccgagctc
gccgcgcacctggggatcggcgaggacgaggtgcgtgaggcgcgcaccgcgctgggcgcc
tacaacgcctcctcgctggacgcccgcacccgggacgaggacgccgacgaaggcagtgcc
tggtcccaccacctcggcggggacgacccggcgctggaacgggtggagaacctgaccgcg
ctgcgcccgctgatcgcacggctgccggagcgcgaacgcgccatcctcgccctgcggttc
ggctccgggctgacccagcgcgagatcggccgccggctgggcctgtcccagatgcacatc
tcccgcctgctcacccgcaccctcgccacgctgcgcgaacaactcctcgccgagccctga
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