Streptomyces cyaneochromogenes: EJ357_09460
Help
Entry
EJ357_09460 CDS
T06811
Name
(GenBank) TIR domain-containing protein
Organism
scya
Streptomyces cyaneochromogenes
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
nSTAND1
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_EML
WD40_MABP1-WDR62_1st
Ge1_WD40
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_EIPR1
TIR_2
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_DCAF4
WD_LRWD1
Beta-prop_Vps41
AAA_16
Nbas_N
Beta-prop_Nup120_160
WD40_RFWD3
DUF7165
Cytochrom_D1
Beta-prop_SPT8
AAA_22
AAA_29
ABC_tran
ThsB_TIR
AAA_21
NACHT
ATPase_2
SMC_N
Motif
Other DBs
NCBI-ProteinID:
AZQ33660
UniProt:
A0A3Q9EQI9
LinkDB
All DBs
Position
complement(2149692..2153690)
Genome browser
AA seq
1332 aa
AA seq
DB search
MPQLFISHSSRDRAVAQRVADWLKSVGFEGLFLDVDPDAGIPAGQRWEAELYTQLHRADA
VIYLASAASRESHWCFAELTHARRAKRPVVPVRLDDAPRPGILGDVQWVDLRDGERAYGR
ILEGLRLAGITAEGSFARDPVRPPYPGLEPFSAEDAAVFFGRDRDIERLLEALDPVMRYD
GGRFVAVVGPSGSGKSSLLRAGVLPRLLRRPHRWVVLPPFRPGRQPTANLVAALERAFAD
QGHPQTYDELRRALADGSAGLVRLAARLAHPPRADGESRMVLVVVDQAEELVGLTGIAEQ
RSFLRLLRAGLGPDSPLWVLATVRSEFLTTSPERAGLADAVDDCVLIQPIGPDRLPEVIE
RPAQQAALTFEAGLVTRMVNETAGGDALPLLAYTLRELYLRAAGTGTVTRDHYEQLDGVV
GALRGRADRIRAELQGRGVGGAVLPTLLKFAAVEGDRPPTGRRIAYAELGADERRVADAF
VEARLLVRTGDAGTGTTVEVAHEALLRQWDPLRDRIEESRNLLRLRSDLERLAADWERGE
QDRAYLLRGARLQAFEDWAGRHPGELGPAERQFLAASRAQARSELDAARRSNRRLRALAA
GLSLLLVLTVLATGLAYVSNARAQSRARLALAGRLGAESDRLAGSRPDVAVLVGLQSLSV
AHGDHPQPHPPSGLITGLSRITHPSTLLAHPDQVQSAAFSPDGRLLATCGWDRTVRLWNA
RTGAPVGKPLTGHQAAVTEVEFDPAGRLLAAGAMDGTVRLWDAVTRRQTAVLRGHTEMVH
DLAFDPVGRTLATASLDGTVRLWDVRRSRLRTVLKGHQDAVTGVAFSPNGRRLATSSWDM
TARLWSLGPGAPREVRTFKGHRDWLRRVVYSPDGRSIATAGADGTARVWDVATGRPRDWN
VDAHGRDIWSVAFSPDGRLLATAGDDGTARLYDARTGEQQGLPLVGHTNLVNQVVFSPDG
KRLVTTSWDRTARLWQVARTHSVSRSLVGHEGDVNGVDFAPDGRLLATAGQDGTARLWRL
GPGTPATRVLRGHDGAVYRAVFSPDGSLLATAGEADAVRLWNLRTDPPRPLRTLTGSHGG
VQDVAFSPDGTLLAAADGDAEVRLWSVDDGRALGALPDGHGESVNGVAFSPDGRLLATVS
DDQTVLLWDVDRRGHVGKPLKGHTNAVQEVAFSPDGRLLATASLDHTVRVWDVATRRQRG
APLTGFTAGVEDVAFSPDGRLVAGAGDDGTVRTWQVRTGRPAGLVLTGHRGEVYAVAFGP
GGRSIASAGADDTARVWDRGFTSWVEYGCRLVDRNLTAAEWQQYVPGRRYERTCPNLPSG
AGAPADAPAARY
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagctcttcatcagccacagcagccgggaccgagccgtggcccagcgggtcgcc
gactggctcaagtcggtcgggttcgagggcctgttcctcgatgtcgaccccgatgcgggc
atccccgcggggcagcgctgggaggcggagctctacacgcagctgcaccgggccgacgcg
gtgatctacctggcgagcgcggcgtcacgggagtcgcactggtgcttcgccgagctgacc
cacgcccggcgggccaagcggccggtcgtacccgtacggctcgacgacgcgccccgcccg
ggcatcctgggcgatgtccaatgggtggacctgcgggacggtgaacgggcctacggccgg
atcctcgaaggactgcggctcgcgggcatcaccgccgagggctccttcgcccgggatccg
gtccgaccgccctatccggggctcgaaccgttctcggccgaggacgcggcggtgttcttc
gggcgcgaccgcgacatcgagcggctccttgaggcactggaccccgtgatgcggtacgac
ggcggccggttcgtggccgtcgtcggcccttcgggcagcggcaagtcctcgctgctgcgc
gcgggcgtcctgccccggctgctgcgccggccgcaccgatgggtggtgctgccgcctttt
cggcccggcaggcaacccacggccaacctggtcgcggccctggaacgcgccttcgccgac
cagggccacccgcagacgtacgacgaactgcggcgggccctcgccgacggctcggcgggc
ctcgtccgcctcgcggcccggctcgcccaccccccaagggcggacggcgagtcccgcatg
gtcctcgtggtcgtcgaccaggcggaggaactggtcggcctgaccggcatcgcggagcag
cgctccttcctgcggctcctgcgtgccgggctcggtccggacagccccctgtgggtgctg
gccacggtgcggtcggagttcctgaccacgagcccggagcgcgcgggactcgccgacgcc
gtcgacgattgcgtgctgatccagccgatcggccccgaccggctgccggaggtcatcgaa
cgccccgcccagcaggccgcgttgaccttcgaagcgggtctggtcacccgcatggtgaac
gagacggcggggggcgacgccctgcccctcctcgcctacaccctgcgcgagctctatctg
cgcgccgccggcacgggcacggtcacccgcgaccactacgagcaactcgacggagtcgtg
ggcgcgttgcgcggccgggccgaccggattcgcgcggaactgcaagggcgaggcgtgggt
ggcgcggtgctcccgaccctgttgaagttcgccgcggtggagggcgaccgaccgcccacc
ggccgacggatcgcgtacgccgaactcggcgcggacgaacggcgcgtggccgacgccttc
gtcgaggcccggctgctcgtccgcaccggcgacgccggcacgggcaccacagtcgaggtc
gcccatgaggccctgctgcgccagtgggatccgttgcgcgaccgcatcgaggagtccagg
aacctgctgaggctgcgttccgacctggagcggctggccgccgactgggagcgcggcgaa
caggaccgggcctacctcctgcgcggggccaggctccaggccttcgaggactgggccggc
cggcaccccggcgaactcggcccggcggaacggcagttcctcgccgcgagccgcgcccag
gccaggagcgaactcgacgcggcgaggcgctccaaccggcgcctgcgtgcactcgccgcc
ggactgagcctgctgctggtcctgaccgtgctcgccaccgggctcgcctacgtcagcaac
gcacgcgctcagtcccgtgcccggctggccctcgcgggcagactcggcgcggagtcggac
cgcctggccgggagccgcccggacgtggccgtcctggtgggcctgcagagcctcagcgtg
gcccacggcgaccacccgcagccgcaccccccgtccgggctgatcaccggactctcccgg
atcacccacccgtcgaccctgctcgcccaccccgaccaggtccagagcgcggccttcagc
cctgacgggcggctgctcgccacctgcggctgggaccggaccgtacgcctgtggaacgcg
aggaccggtgcgcccgtcggtaagcccttgaccggacatcaggccgcggtgacggaggtg
gagttcgaccctgcgggcaggttgctcgcggcaggcgccatggacggcaccgtccgcctg
tgggacgcggtgacacgaaggcagaccgcggtgctccggggacacaccgaaatggtgcac
gacctggccttcgacccggtcggccgcaccctggccaccgcgagcctcgacggcaccgtt
cgcctctgggacgtacggcgatcgcgcctgcgcaccgtcctgaagggccaccaggacgcc
gtcaccggcgtcgccttcagccccaacggccgccggctcgccacctccagctgggacatg
accgcacgactgtggagcctggggcccggcgcgccgcgcgaggtgcggacgttcaagggc
caccgcgactggctgcgacgggtggtgtacagccccgacggacggagcatcgccaccgcc
ggcgccgacggtacggcccgcgtgtgggacgtcgccacgggcaggccccgggactggaac
gtcgacgcccatggccgtgacatctggtcggtcgccttcagccccgacggccggctgctc
gccaccgcgggcgacgacgggacggcccggctgtacgacgcgcgcaccggggagcagcag
ggcctgccgctcgtcgggcacaccaacctggtcaaccaggtcgtgttcagcccggacggc
aagcggctcgtcacgaccagctgggaccgcacggcccggctctggcaggtcgcccggacc
cactcggtcagcaggtcgctcgtcggccacgaaggcgacgtcaacggcgtcgacttcgcc
cccgacggccggctcctcgccaccgcggggcaggacgggaccgcccgcctgtggcgcctc
ggcccgggcacgcccgccacccgcgtgctgcgcggccacgacggagcggtgtaccgggcg
gtgttcagccccgacggcagcctcctcgccaccgccggcgaggcggacgccgtacgcctg
tggaacctgcgcaccgacccgccgcgcccgctgcggacgctgaccggctcccacggcggt
gtccaggacgtggcgttcagccccgacggcacactgctggccgcggccgacggggacgcc
gaggtacggctgtggtcggtggacgacggccgggccctgggcgccctgccggacggacac
ggcgaatcggtgaacggcgtcgcgttcagccccgacgggcgactgctggcaactgtgagc
gacgaccagaccgtgctgttgtgggacgtcgaccggcgcgggcacgtcgggaagccgctg
aagggacacacgaacgccgtgcaggaagtggcgttcagcccggacggcaggctgctcgcg
accgcgagcctcgaccacaccgtgcgcgtgtgggacgtcgcgacccgccggcagcgcggc
gcacccctcaccgggttcaccgccggcgtcgaggacgtcgccttcagccccgacgggcgt
ctcgtcgccggcgccggggacgacggcaccgtacggacctggcaggtgcgcacgggccgg
cccgccggactcgtcctcaccggccaccggggcgaggtctacgccgtcgccttcggtccc
ggcggccggtcgatcgcctccgccggcgccgacgacaccgctcgcgtctgggaccggggc
ttcacgtcctgggtggagtacggctgccggctggtcgaccgcaacctcaccgccgcggag
tggcagcagtacgtaccgggccggcgctacgaacgcacgtgcccgaacctgccgtccgga
gccggtgccccggccgacgctcccgccgcgaggtactga
DBGET
integrated database retrieval system