Streptomyces cyaneochromogenes: EJ357_10840
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Entry
EJ357_10840 CDS
T06811
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
scya
Streptomyces cyaneochromogenes
Pathway
scya00040
Pentose and glucuronate interconversions
scya01100
Metabolic pathways
scya02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
scya00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
EJ357_10840
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EJ357_10840
Enzymes [BR:
scya01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
EJ357_10840
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AZQ33908
UniProt:
A0A3S9M3X6
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Position
complement(2442347..2443660)
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AA seq
437 aa
AA seq
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MKAQIWHGHATRKCAVLIGCTALVLGLTGTGAQAGPRDLGRQVLGAGDGWGSEGAGTSGG
SAAEAEHVYTVTTWAEFKAALKAGGDAPKIIKVDGMIDAVSEGCEAFVTGGYDLQEYLEA
YDPAVWGNDEVASGPQEDARVASAANQDTEIKANIPSNTTIVGVGRNSGILGASLQIKGV
SNVILRNLTIEAPLDCFPKWDPTDDNKTGNWNSEYDAVVVYGTDHVWLDHNTFTDGRYPD
SERPVYFGKVFQQHDGLTDIVRGSNYVTVSWNRFQDHDKNMLIGNGDGLTTTDGGKLKVT
MHHNRFEGILQRSPRVRFGQVDVYNNHYVVTEEQKDDYYIFGVGISSRLHASDNAISLPA
GASVGKVLKKWNESPLTAENNYVNGKLTDLIAVHNAEIPAETLQSGAGWTPTLRTKVDNP
KAVPGIVNRCAGAGRLG
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcccagatatggcatgggcatgccacaaggaagtgtgctgtgctgatcggctgc
accgcgctcgtcctcgggctgaccggcaccggagcgcaggccgggccgcgtgacctcggc
cggcaggtcctcggcgcgggggatggctggggctcggaaggggcggggacgagcggtggt
tcggccgccgaggccgagcacgtctacaccgtcaccacctgggccgagttcaaggccgcg
ctgaaggccggcggtgacgcgccgaagatcatcaaggtcgacggcatgatcgacgccgtc
tccgagggctgcgaggccttcgtcaccggcggctacgaccttcaggagtacctcgaggcg
tacgaccccgccgtctggggcaacgacgaggtcgccagcggtccgcaggaggacgcgcgg
gtcgcctccgccgccaaccaggacacggagatcaaggccaacatccccagcaacaccacc
atcgtcggcgtcggcaggaactccggcatcctcggcgccagcctccagatcaagggcgtc
tcgaacgtcatcctgcgcaacctcaccatcgaggccccgctcgactgcttccccaagtgg
gacccgaccgacgacaacaagaccggcaactggaactccgagtacgacgccgtggtcgtc
tacggcaccgaccatgtgtggctcgaccacaacacgttcaccgacgggcgctacccggac
agcgagcggccggtctacttcggcaaggtgttccagcagcacgacggtctgacggacatc
gtgcgcggctccaactacgtgaccgtgtcctggaaccgcttccaggaccacgacaagaac
atgctgatcggcaacggcgacggcctcaccaccaccgacggcggcaagctcaaggtcacc
atgcaccacaaccgcttcgagggcatcctccagcgctccccgcgcgtgcggttcgggcag
gtcgacgtctacaacaaccactacgtggtgaccgaggagcagaaggacgactactacatc
ttcggtgtcggtatctcctcgcggctccacgccagcgacaacgccatctcgctgccggcc
ggggcgagcgtcggcaaggtcctgaagaagtggaacgagtcgccgctgaccgccgagaac
aactacgtcaacggcaagctgacggatctcatcgcggtccacaacgccgagatcccggcc
gagaccctccagtccggcgccgggtggacaccgaccctccggaccaaggtcgacaacccc
aaggcggtgcccggaatcgtcaaccgctgcgcgggcgccggccgtctgggctga
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