Streptomyces cyaneochromogenes: EJ357_12120
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Entry
EJ357_12120 CDS
T06811
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
scya
Streptomyces cyaneochromogenes
Pathway
scya03030
DNA replication
scya03430
Mismatch repair
scya03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EJ357_12120
03430 Mismatch repair
EJ357_12120
03440 Homologous recombination
EJ357_12120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scya03032
]
EJ357_12120
03400 DNA repair and recombination proteins [BR:
scya03400
]
EJ357_12120
Enzymes [BR:
scya01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EJ357_12120
DNA replication proteins [BR:
scya03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EJ357_12120
DNA repair and recombination proteins [BR:
scya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EJ357_12120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
AZQ34131
UniProt:
A0A3Q9ERB5
LinkDB
All DBs
Position
complement(2725079..2728618)
Genome browser
AA seq
1179 aa
AA seq
DB search
MSKPPFTHLHVHTQYSLLDGAARLKDMFNACNEMGMTHIAMSDHGNLHGAYDFFHSAKKA
GVTPIIGIEAYVAPESRRNKRKIQWGQPHQKRDDVSGSGGYTHKTMWAVNKTGLHNLFRL
SSDAYAEGWLQKWPRMDKETISQWSEGIVASTGCPSGELQTRLRLGQYDEALKAAADYQD
IFGKDRYFLELMDHGIEIEHRVRDGLLEIGKKLGIPPLVTNDSHYTYAHEATAHDALLCI
QTGKNLSDPDRFKFDGTGYYLKSTDEMYAIDSSDAWQEGCANTLLVAEMVDTTGMFEAKN
LMPKFDIPEGYTEVTWFREETMRGMHRRFPDGIPDDRMKQVEYEMDTIISMGFPGYFLVV
ADFIMWAKSQGIAVGPGRGSAAGSIVAYAMGITDLDPIPHGLIFERFLNPERISMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIDLDGITNPSHPRYSEAGEIRGMYENEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSEPIVDHAPIWVRHTDGVTITQWDYPQCESLGLLKMDFLGLRNLTIMDDAVKMVKS
NKGIELDLLALPLDDPKTFELLQRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVSALY
RPGPMGMDSHTNYALRKNKLQEITPIHPELEEPLKEVLDVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPEELAKNFVLFQKGARDKGYSDEAIQALWDVLVPFAGYAFNKA
HSAAYGLVSYWTAYLKANHPAEYMAGLLTSVKDDKDKSAVYLNECRRMGIKVLPPNVNES
VHNFAAQGDDVILFGLEAVRNVGTNVVESIIRSRKAKGKYASFPDYLDKVEAVACNKRTT
ESLIKAGAFDSLGHTRKGLTAHFDSMIDNVVAVKRKEAEGQFDLFGGMGEEDTSEPGFGL
DVEFTTEEWDKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGIAQLTGGEHADGAVV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDAVVFVKGRL
DKREDVPRLVAMELQVPDLSNAGTNAPVILTIPATRVTPPMVSRLGEILSHHKGESEVRI
KLQGPTKTTVLRLDRHRVKPDPALFGDLKVLLGPSCLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaagccgccgttcacgcacctgcacgtccacacccagtactcgctgctggacggt
gccgcgcggctgaaggacatgttcaacgcgtgcaacgagatgggcatgacgcacatcgcc
atgtccgaccacggcaacctccacggggcgtacgacttcttccacagcgcgaagaaggcc
ggagtcaccccgatcatcgggatcgaggcgtatgtcgcccccgagtcccggcgcaacaag
cgcaagatccagtggggccagccgcaccagaagcgcgacgacgtctccggttccggtggt
tacacccacaagacgatgtgggccgtgaacaagacgggtctgcacaacctcttccggctg
tcctcggacgcgtacgccgagggctggctgcagaagtggccccgcatggacaaggagacc
atctcccagtggtccgaggggatcgtcgcctccaccggctgcccctccggtgagctccag
acccgcctgcgcctcggccagtacgacgaggccctgaaggcggccgccgactaccaggac
atcttcggcaaggaccgatacttcctggagctgatggaccacggcatcgagatcgagcac
cgggtccgtgacggcctgctggagatcggcaagaagctcggcatcccgccgctggtcacc
aacgactcgcactacacgtacgcgcacgaggcgaccgcgcacgacgccctgctgtgcatc
cagaccggcaagaacctctccgacccggaccgcttcaagttcgacggcaccggctactac
ctgaagtccacggacgagatgtacgccatcgactcctcggacgcctggcaggagggctgc
gccaacacgctcctcgtcgccgagatggtcgacaccaccggcatgttcgaggcgaagaac
ctcatgccgaagttcgacatccccgagggctacaccgaggtcacctggttccgcgaggag
accatgcgcggcatgcaccgccgcttcccggacggcatcccggacgaccgtatgaagcag
gtcgagtacgagatggacaccatcatctcgatggggttcccgggctacttcctcgtggtc
gccgacttcatcatgtgggccaagagccagggcatcgcggtgggccccggccgaggttcc
gcggccggctcgatcgtcgcctacgccatgggcatcaccgacctcgacccgatcccgcac
ggcctgatcttcgagcggttcctcaaccccgagcgcatctccatgcccgatgtcgacatc
gacttcgacgagcgtaggcgcgtcgaggtgatcaggtacgtgaccgagaaatacggcgcc
gacaaggtcgccatgatcggcacctacggcaagatcaaggccaagaacgcgatcaaggac
tccgcgcgcgtgctgggctatccgtacgcgatgggcgaccgcctcaccaaggcgatgccc
gccgacgtcctcggcaagggcatcgacctcgacggcatcaccaacccctcgcacccgcgc
tacagcgaggcgggcgagatccgcgggatgtacgagaacgagccggacgtcaagaaggtc
atcgacaccgccaagggcgtcgagggcctggtgcggcagatgggcgtgcacgccgccggc
gtgatcatgtccagcgagcccatcgtcgaccacgccccgatctgggtgcggcacacggac
ggcgtgaccatcacgcagtgggactacccgcagtgcgagtcgctcggcctgctgaagatg
gacttcctcggcctgcgcaacctgacgatcatggacgacgccgtcaagatggtgaagtcc
aacaagggcatcgagctcgacctgctggccctgccgctcgacgatccgaagaccttcgaa
ctgctccagcgcggcgacaccctgggcgtcttccagttcgacggcggcccgatgcgttcg
ctgctgcgcctgatgaagcccgacaacttcgaagacatctccgccgtctccgcgctgtac
cgtccgggcccgatgggcatggactcgcacaccaactacgccctgcgcaagaacaagctc
caggagatcaccccgatccacccggagctggaggagcccctcaaggaggtcctggacgtc
acctacggcctgatcgtgtaccaggagcaggtgcagaaggccgcccagatcatcgccggg
tactcgctcggcgaggccgacatcctgcgccgcgtgatgggcaagaagaagcccgaggaa
ctggccaagaacttcgtcctcttccagaagggcgcccgggacaagggctacagcgacgag
gccatccaggccctgtgggacgttctggtccccttcgccggatacgcgttcaacaaggcg
cactccgccgcgtacggccttgtctcctactggaccgcctacctcaaggccaaccacccg
gccgagtacatggccgggctgctcacctcggtcaaggacgacaaggacaagtcggccgtc
tatctcaacgagtgccggcgcatgggcatcaaggtgctcccaccgaacgtcaacgagtcg
gtgcacaacttcgccgcgcagggcgacgacgtgatcctcttcggcctcgaagccgtgcgc
aacgtcggcaccaacgtggtcgagtcgatcatcaggagccgcaaggccaagggcaagtac
gcctccttccccgactacctggacaaggtcgaggcggtcgcgtgcaacaagcgcaccacg
gagtcgctgatcaaggcgggcgcgttcgactccctgggccacacccgcaagggcctgacc
gcgcacttcgactcgatgatcgacaacgtggtcgcggtcaagcgcaaggaggccgagggc
cagttcgacctcttcggcggcatgggcgaggaggacaccagcgagcccgggttcggactc
gacgtggagttcaccaccgaggagtgggacaagacctatctgctcgcccaggagcgggag
atgctcggtctgtacgtctccgaccacccgctcttcggcctggagcacgtgctgtccgac
aaggccgacgcgggcatcgcccagctgaccggcggtgagcacgcggacggtgccgtggtg
accatcggcggcatcatctcgggcctccagcgcaagatgaccaagcagggcaacgcctgg
gcgatcgccacggtcgaggacctcgccggttccatcgagtgcatgttcttcccggctacg
taccagctcgtctcgacccaactcgtcgaggacgccgtggtgttcgtcaagggccgcctc
gacaagcgagaggacgtgccgcgcctggtcgcgatggagctccaggtccccgacctgtcg
aacgccggcaccaacgcgcccgtgatcctcaccatcccggccacccgggtcaccccgccg
atggtcagccgtctcggcgagatcctcagccaccacaagggcgagagcgaggtccgcatc
aagctccagggtccgaccaagacgacggtgctgcgactggaccggcaccgggtgaagccc
gacccggcgctcttcggtgacctgaaggtgctgctcgggccgtcctgcctggcgggctga
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