Streptomyces cyaneochromogenes: EJ357_16520
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Entry
EJ357_16520 CDS
T06811
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
scya
Streptomyces cyaneochromogenes
Pathway
scya03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EJ357_16520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scya03400
]
EJ357_16520
Enzymes [BR:
scya01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EJ357_16520
DNA repair and recombination proteins [BR:
scya03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EJ357_16520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_22
Helicase_RecD
PIF1
AAA_16
PhoH
NPHP3_N
TraI_hel_assoc_N
TrwB_AAD_bind
nSTAND3
HTH_IclR
DEAD
AAA
ABC_tran
UvrD_C
SLFN-g3_helicase
ATPase_2
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
AZQ34892
UniProt:
A0A3Q9ESD3
LinkDB
All DBs
Position
complement(3706612..3708870)
Genome browser
AA seq
752 aa
AA seq
DB search
MSNQAGTSTGERRLAVLEGVLERITYANEENGYTVARVDTGRGGGDLLTVVGALLGAQAG
ESLRMEGRWGSHPQYGKQFLVENYTTVLPATVQGIRRYLGSGLVKGIGPVFADRITQHFG
VDTLKIIEEEPKRLIEVPGLGPKRTKKIADAWEEQKAIKEVMLFLQTVEVSTSIAVRIYK
KYGDASISVVKNQPYRLAADVWGIGFLTADKIAQSVGIPHDSPERVKAGLQYALSQATDQ
GNCYLPEERLIADAVKLLQVDTGLVIECLAELAQVPEDGGDPGVVREKVPGPDGGSGDPV
TAVYLVPFHRAELSLSAQLLRLLRTDEDRMPGFRDVAWDKALGWLKGRTGADLAAEQEAA
VKLALTEKVAVLTGGPGCGKSFTVRSIVELARAKKARVVLAAPTGRAAKRLAELTGAEAS
TVHRLLELKPGGDAAYDRDRPLQADLVVVDEASMLDLLLANKLVKAVPPGAHLLFVGDVD
QLPSVGAGEVLRDLLADGSPIPAVRLTRVFRQAQQSGVVTNAHRINAGQHPVTDGMKDFF
LFVEDDTEEAGRLTVDVAARRIPAKFGLDPRRDVQVLAPMHRGPAGAGTLNGLLQQAITP
GRPDLAEKRFGGRVFRVGDKVTQIRNNYEKGENGVFNGTVGVVTSLDPVDQRLTVLTDED
EEVPYEFDELDELAHAYAVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKQLV
VLVGSRKAIGQAVRTVSAGRRCTALDFRLAGS
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatcaggcggggacttccacgggtgaacggcggctcgccgtgctcgaaggcgtg
ctggagcggatcacgtacgccaacgaggagaacggctacacggtcgcccgtgtcgacacc
gggcgcggcgggggcgacctgctcacggtcgtcggcgcgctgctcggcgcccaggccggt
gagtcgctgcggatggagggccgttggggctcccacccccagtacgggaagcagtttctc
gtcgagaactacacgacggtcctgccggccaccgtccagggcatccgccgctacctcggc
tccggcctggtcaagggcatcggcccggtcttcgccgaccgcatcacccagcacttcggt
gtggacaccctgaagatcatcgaggaggagcccaagcggctcatcgaggtcccaggcctc
ggccccaagcgcaccaagaagatcgccgatgcctgggaggagcagaaggcgatcaaggag
gtcatgctcttcctgcagacggtggaggtctccacgtccatcgccgtgcggatctacaag
aagtacggcgacgcctcgatctccgtcgtgaagaaccagccctaccggctggccgccgac
gtctggggcatcggcttcctcaccgccgacaagatcgcccagtccgtcggcatcccgcac
gacagcccggagcgggtcaaggcgggcctgcagtacgcgctgtcgcaggccaccgaccag
ggcaactgctacctccccgaggaacggctgatcgcggacgcggtcaagctcctccaggta
gacaccggcctcgtcatcgagtgcctcgcggagctggcccaggtccccgaggacggcggc
gaccccggtgtcgtacgggagaaggtccccggtcccgacggcggctcgggcgatcccgtc
accgccgtctacctcgtccccttccaccgggccgaactctccctctccgcccagctgttg
cgcctgctgcgcaccgacgaggaccgtatgccgggcttccgtgacgtggcctgggacaag
gcgctgggctggctgaagggccgcaccggcgccgacctcgccgccgagcaggaggccgcc
gtgaagctggcgctgacggagaaggtcgccgtcctgaccggcggtcccggctgcggcaag
tccttcaccgtgcgctcgatcgtggagctggcccgcgccaagaaggccagggtcgtgctc
gccgcccccaccggccgcgccgccaagcgactcgccgagctcaccggagcggaggcctcc
accgtccaccgcctgctggagctcaagcccggcggcgacgcggcctacgacagggaccgc
ccgctccaggccgacctggtcgtggtcgacgaggcgtccatgctggacctgctgctggcc
aacaagctggtcaaggccgtaccgccgggcgcccatctgctcttcgtgggcgatgtcgac
cagttgcccagcgtcggggcgggggaggtcctcagggacctgctcgccgacggcagcccc
atcccggccgtgcgcctcacgcgcgtgttccgtcaggcccagcagtcgggcgtggtgacc
aacgcgcaccggatcaacgccgggcagcaccccgtcaccgacggcatgaaggacttcttc
ctcttcgtcgaggacgacacggaggaggccggacggctcacggtggacgtcgccgcccgt
cgtattccggccaagttcggcctcgatccgcgccgggacgtccaggtgctcgcgcccatg
caccgcggccccgccggcgcgggcacgctgaacggcctgctgcagcaggccatcacgccg
ggacgccccgacctcgcggagaagcggttcggcggccgggtcttccgtgtcggcgacaag
gtcacccagattcgcaacaattacgagaagggggagaacggtgtcttcaacggcaccgtg
ggcgtggtgacctcgctcgacccggtcgaccagcgcctcacggtgctgacggacgaggac
gaggaggttccgtacgaattcgacgaactggatgaactcgcgcatgcgtacgcggtgacc
attcaccgttcacagggaagtgaatatcccgcagtggtgatccccgtcaccacaggagca
tggatgatgctccagcggaacctcctgtacaccgccgtgacccgggccaagcagctggtc
gttctcgtggggtcacgcaaggcgatcggtcaggcggtgcgcacggtgtcggcagggcgg
cgctgcacggcgctcgacttccggctcgcgggctcctga
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