Streptomyces cyaneochromogenes: EJ357_20390
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Entry
EJ357_20390 CDS
T06811
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
scya
Streptomyces cyaneochromogenes
Brite
KEGG Orthology (KO) [BR:
scya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scya03016
]
EJ357_20390 (thpR)
Enzymes [BR:
scya01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
EJ357_20390 (thpR)
Transfer RNA biogenesis [BR:
scya03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
EJ357_20390 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
aGPT-Pplase3
Imm32
Motif
Other DBs
NCBI-ProteinID:
AZQ35567
UniProt:
A0A3Q9ETU3
LinkDB
All DBs
Position
complement(4548800..4549372)
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AA seq
190 aa
AA seq
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MRLFAAVLPPEDVTRELAAEVAELRGLPGADRLRWTGRPGWHFTLAFYGEVDDDLVPDLS
ARLERAAHRTPSFPLALSGGGQFGHGRALWTGAEGDLATLRLLADRSEAAARKAGVPMGE
HRRYKAHLTVARSRSAVDVRPYVATLAEFTSRTWTVAELALVRSNLPKSGVAGEQPRYEA
VARWPLGGAG
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgagactcttcgccgccgtactgccgcccgaggacgtgacccgtgaactcgccgccgag
gtcgcggagttgcgcgggttgcccggcgcggaccggctgcgctggaccggccgccccggc
tggcacttcaccctcgccttctacggcgaggtcgacgacgacctcgtacccgacctgtcg
gcccgtctggagcgtgccgcgcaccgtacgccgtccttcccgttggccctcagcggcggc
ggccagttcgggcacgggcgggccctgtggacgggggcggagggggacctggcgacactg
cggctgctggccgaccgcagcgaggcggcggcgcgcaaggcgggggtgccgatgggggag
caccggcggtacaaggcccacctgacggtggccaggagccggtcggcggtggacgtacgg
ccgtatgtggcgaccctcgccgagttcacgagccggacctggacggtggccgagctggcg
ctggtgcgcagcaatctgccgaagtccggggtggcgggcgagcagccccggtacgaggcg
gtcgcccgctggccgctcggaggggccggttag
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