Streptomyces cyaneochromogenes: EJ357_20530
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Entry
EJ357_20530 CDS
T06811
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
scya
Streptomyces cyaneochromogenes
Pathway
scya03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
scya00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EJ357_20530
09124 Replication and repair
03420 Nucleotide excision repair
EJ357_20530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scya03021
]
EJ357_20530
03400 DNA repair and recombination proteins [BR:
scya03400
]
EJ357_20530
Enzymes [BR:
scya01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EJ357_20530
Transcription machinery [BR:
scya03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EJ357_20530
DNA repair and recombination proteins [BR:
scya03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EJ357_20530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
ETAA1
IMD
Motif
Other DBs
NCBI-ProteinID:
AZQ35594
UniProt:
A0A3Q9ENF8
LinkDB
All DBs
Position
4577967..4579610
Genome browser
AA seq
547 aa
AA seq
DB search
MNGPLIVQSDKTLLLEVDHEQADACRRAIAPFAELERAPEHIHTYRVTPLGLWNARAAGH
DAEQVVDALVTYSRYPVPHALLVDIADTMDRYGRLTLSKHPTHGLVLTTTDRPVLEEVLR
SKRVAPLVGARIDPDTVAVHPSERGQIKQTLLKLGWPAEDLAGYVDGEAHPIELHEDGWA
LRPYQKQAVENFWHGGSGVVVLPCGAGKTLVGAGSMAQAKSTTLILVTNTVSARQWKHEL
VKRTSLTEDEIGEYSGTKKEIRPVTIATYQVLTTKRKGVYPHLELFDSRDWGLILYDEVH
LLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPA
DCVEVRVNLTDSERLAYATAEQEEKYRFCATTDTKRKVTEALVRRFAGQQILVIGQYIDQ
LDELGEHLNAPVIKGETSNAQREKLFDAFREGEISVLVVSKVANFSIDLPEATVAIQVSG
TFGSRQEEAQRLGRVLRPKADGHQAHFYSVVARDTIDQDFAAHRQRFLAEQGYAYRIVDA
DEILAEG
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggaccactgatcgtccagtcggacaaaaccctgctcctggaggtcgatcacgag
caggccgacgcgtgccgtcgggcgatcgccccgttcgcggagctggagcgggcgcccgag
cacatccacacctaccgggtgacgccgctcggcctgtggaacgcgcgcgcggccgggcac
gacgccgagcaggtcgtcgacgcgctggtgacgtacagccgctaccccgtgccgcacgcg
ctgctcgtcgacatcgccgacacgatggaccggtacggccgcctgaccctctccaagcac
cccacgcacggcctcgtgctcaccaccaccgaccgcccggtcctggaggaggtgctgcgc
tcgaagcgggtcgcgccgctcgtcggcgcccgcatcgacccggacaccgtcgccgtgcac
ccctccgagcgcgggcagatcaagcagacgctgctgaagctgggctggccggccgaggac
ctcgccgggtacgtcgacggcgaggcgcacccgatcgagctccacgaggacggctgggcg
ctgcggccctaccagaagcaggccgtggagaacttctggcacggcggcagcggggtcgtc
gtgctgccgtgcggcgccgggaagaccctcgtcggcgccgggtccatggcccaggcgaag
tcgaccacgctcatcctggtcaccaacaccgtctcggcccgccagtggaagcacgagctg
gtgaagcggacgtcgctcaccgaggacgagatcggcgagtacagcgggacgaagaaggag
atccggcccgtcaccatcgccacgtaccaggtgctgacgacgaagcggaagggcgtctat
ccgcacctggagctcttcgactcccgcgactggggcctgatcctctacgacgaggtgcac
ctgctgccggcgcccgtcttcaagttcaccgccgatctccaggcccggcgccggctcgga
ctgaccgcgaccctggtccgggaggacgggcgtgagtcggacgtgttctcgctgatcggg
ccgaagcggttcgacgctccgtggaaggagatcgaggcgcagggctacatcgcgcccgcc
gactgcgtcgaggtccgggtcaatctcaccgactccgagcggctcgcgtacgccaccgcc
gagcaggaggagaagtaccgcttctgcgcgacgaccgacaccaagcggaaggtcaccgag
gccctcgtccgccggttcgccgggcagcagatcctggtcatcggccagtacatcgaccag
ctcgacgaactgggcgagcacctgaacgccccggtcatcaagggcgagacatccaacgcc
cagcgcgagaagctcttcgacgccttccgggagggcgagatcagcgtcctcgtcgtgtcc
aaggtcgcgaacttctccatcgacctgccggaggccacggtcgccatccaggtctcgggc
accttcggctcgcgccaggaggaggcgcagcggctggggcgggtgctgcggcccaaggcc
gacggccaccaggcccacttctactcggtcgtcgcccgcgacacgatcgaccaggacttc
gccgcgcaccgccagcgcttcctggcggagcaggggtacgcgtaccggatcgtggacgcg
gacgagatcctcgcggagggctag
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