Streptomyces cyaneochromogenes: EJ357_22380
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Entry
EJ357_22380 CDS
T06811
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
scya
Streptomyces cyaneochromogenes
Brite
KEGG Orthology (KO) [BR:
scya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scya03021
]
EJ357_22380
Transcription machinery [BR:
scya03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EJ357_22380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
HTH_3
MarR
HTH_24
HTH_31
DUF7343
Motif
Other DBs
NCBI-ProteinID:
AZQ35889
UniProt:
A0A3Q9ENY3
LinkDB
All DBs
Position
4942955..4943875
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AA seq
306 aa
AA seq
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MSADQGSSKVLTLTKSESAPDAALGPIDDVTALAAAEAPALPATDVPAVPASGDIDTRTL
SRSLFLRLAALDENSPERAYVRDTLIELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIK
AIDRFDCERGVEFPTFAMPTVVGEIKRFFRDTSWSVRVPRRLQELRLALTKASDELSQKL
DRSPTVTELAAVLGVSEEDVVDGLAVGNAYTASSLDSPAPEDDGGEGSLADRLGYEDTAL
EGVEYRESLKPLLAKLPPRERRIIMLRFFANMTQSQIGEEVGISQMHVSRLLTRTLAQLR
EGLISD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagaccagggcagctcgaaggtgctcacgctcacgaagagcgagtccgcgccc
gacgccgcgctcggccccatcgatgatgtgacggccctggcggccgccgaggccccggcc
ctcccggcaactgatgtcccggccgtgccggcctcgggggacatcgacacccgcaccctg
tcccgctccctgttcctgcggctcgccgccctggacgagaacagccccgagcgtgcatac
gtccgggacaccctgatcgagctcaacctccccctcgtgcgctacgcggcggcccgcttc
cgctcgcgcaacgagccgatggaggacatcgtccaggtcggcaccatcggcctgatcaag
gcgatcgaccgcttcgactgcgaacggggcgtggagttcccgacgttcgcgatgccgacg
gtggtcggcgagatcaagcggttcttccgcgacacgtcctggtcggtgcgcgtcccgcgc
cgtctgcaggagctgcgcctggccctcaccaaggccagcgacgagctctcgcagaagctg
gaccgctccccgacggtgaccgaactcgccgccgtgctgggcgtgtccgaggaggacgtc
gtcgacggcctcgcggtcggcaacgcctacacggcctcctcgctggactccccggccccg
gaggacgacggcggcgagggctccctggccgaccgcctcggctacgaggacaccgccctt
gagggcgtcgagtaccgcgagtccctcaagccgctgctggccaaactcccgccccgcgag
cggcggatcatcatgctgcgcttcttcgccaacatgacccagtcgcagatcggcgaggag
gtcggcatctcccagatgcacgtctcccggctgctgacccggacgctggcgcagctgcgc
gagggcctcatctccgactga
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