Streptomyces cyaneochromogenes: EJ357_26595
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Entry
EJ357_26595 CDS
T06811
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
scya
Streptomyces cyaneochromogenes
Brite
KEGG Orthology (KO) [BR:
scya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scya03016
]
EJ357_26595
Enzymes [BR:
scya01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
EJ357_26595
Transfer RNA biogenesis [BR:
scya03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
EJ357_26595
Prokaryotic type
tRNA splicing ligases
EJ357_26595
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AZQ36574
UniProt:
A0A3Q9EQE4
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All DBs
Position
5844441..5845634
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AA seq
397 aa
AA seq
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MSYVEMPGAKVPIRMWTDPATVEDGALQQLRNVATLPWIKGLAVMPDVHYGKGATVGSVI
AMQGAVCPAAVGVDIGCGMSAVKTSLTANDLPGDLSRLRSKIEQAIPVGRGMHDSPVDPG
RMHGFATAGWDDFWGRFDGIADAVKFRQERAGKQMGTLGSGNHFVEVCTDTDGSVWLMLH
SGSRNIGKELAEFHIGVAQKLPHNQGLIDRDLAVFIADTPQMAAYRNDLFWAQEYAKYNR
TIMMALLKDVIRKEFKKAKPTFEAEISAHHNYVAEERYDGMDLLVTRKGAIRAGSGEYGI
IPGSMGTGSYIVKGLGNAKSFNSASHGAGRRMSRNAAKRRFSTKDLEEQTRGVECRKDSG
VVDEIPSAYKPIEQVIDQQRDLVEVVAKLKQVVCVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacgtggagatgccgggcgcgaaggttccgatccgcatgtggaccgacccggcg
acggtcgaggacggtgccctgcagcagctgcggaacgtcgcgaccctgccgtggatcaag
ggcctcgccgtgatgccggacgtgcattacgggaagggggcgacggtcgggtccgtcatc
gccatgcagggggccgtgtgtcctgcggcggtgggggtcgacatcgggtgcgggatgtcg
gcggtgaagacgtcgctgacggccaatgacctgccgggggatctgtcgcggctgcggtcg
aagatcgagcaggccattccggtggggcgggggatgcatgacagtcccgtggatccgggg
cggatgcacgggttcgccaccgcggggtgggacgacttctgggggcggttcgacgggatc
gcggacgcggtcaagttccgtcaggagcgggccggaaagcagatgggaacgctcggaagc
ggcaaccactttgtcgaggtgtgcaccgatacggacggttccgtctggctcatgctgcac
tccggttcccggaacatcggcaaggagctcgccgagttccacatcggcgtggcccagaag
ctcccgcacaaccaggggctgatcgaccgtgacctcgccgtgttcatcgcggacaccccg
cagatggcggcgtaccgcaacgacctgttctgggcgcaggagtacgccaagtacaaccgc
acgatcatgatggcgctcctgaaggacgtgatccgcaaggagttcaagaaggcgaagccg
accttcgaggccgagatcagcgcgcaccacaactacgtggccgaggagcgttacgacggc
atggatctgctcgtgacccgcaagggcgcgatccgggccggctccggcgagtacgggatc
atcccgggctcgatgggcacggggtcgtacatcgtgaagggcctcgggaacgcgaagtcc
ttcaactcggcctcgcacggcgcgggtcggcgcatgagccggaacgcggccaagcgtcgc
ttctcgacgaaggacctggaggagcagacgcggggcgtggagtgccgtaaggactccggt
gtcgtggacgagattccgagcgcgtacaagccgattgagcaggtcatcgatcagcagcgg
gacctcgtggaggtcgtggcgaagctgaagcaggtcgtctgcgtgaagggctga
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