Streptomyces cyaneochromogenes: EJ357_34270
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Entry
EJ357_34270 CDS
T06811
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
scya
Streptomyces cyaneochromogenes
Pathway
scya03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scya00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EJ357_34270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scya03019
]
EJ357_34270
03400 DNA repair and recombination proteins [BR:
scya03400
]
EJ357_34270
Enzymes [BR:
scya01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EJ357_34270
Messenger RNA biogenesis [BR:
scya03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EJ357_34270
DNA repair and recombination proteins [BR:
scya03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EJ357_34270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
Pribosyltran
Zn_ribbon_TFIIB
AAA_22
Helicase_RecD
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
AZQ40736
UniProt:
A0A3S9MNK2
LinkDB
All DBs
Position
7499980..7502139
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AA seq
719 aa
AA seq
DB search
MDVLELRAEADAILAELVGAPGGSARLREDQWQAVAALVEERRRALVVQRTGWGKSAVYF
VATALLRRRGSGPTVIVSPLLALMRNQVEAAARAGIRAHTINSANPEEWEAIHEEVERGE
TDVLLVSPERLNAVDFREQVLPKLAATTGLLVVDEAHCISDWGHDFRPDYRRLRAMLAEL
PAGVPVLATTATANARVTADVAEQLGTGGGEALVLRGPLDRESLRLGVVRLPDAAHRLGW
LAEHLDDLQGSGIVYALTVAAAEEATAFLRQRGFRVASYTGRTENADRLQAEADLQQNRV
KALIATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVEHADVLLLPGKEDEAI
WRYFADTAFPPEARVRETLSALAGAGRPLSVPALEAVVDLRRTRLETMLKVLDVDGAVKR
VKGGWISTGEQWVYDSERYAWVARQRAAEQQAMRDYVSTTQCRMEFLRRQLDDEGAVPCG
RCDNCAGPWVDSDVSAETLTGAVKELDRPGVEIEPRRMWPTGMPALGIDLKGRIAAKEQC
STGRALGRLSDIGWGNRLRPLLAENAPDGPVPDDVLQAAVAVLADWARSPGGWARDVPDA
SARPVGVVAVPSVTRPQLVGSLAEGIASVGRLPFLGTLTYGGQGGAHAARRSNSAQRLRG
LFGAFTVSEELAGALARSPGPVLLVDDCTDSGWTLAVAARLLRQAGAEQVLPLVLAASG
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggacgttctggagctgcgcgctgaagccgatgccatcctcgccgagctcgtcggtgcc
cccggtgggtcggcgcggctgcgggaggatcagtggcaggcggtggcggccctggtggag
gagcgtcggcgcgccctggtggtgcagcgcaccggctggggaaagtcggcggtgtacttc
gtggccaccgccctgctgcgccgacgtggctccgggcccaccgtgatcgtctcgccgttg
ctggcgctgatgcgcaaccaggtcgaggcggccgcgcgggcgggtatccgggcgcacacg
atcaactcggccaatccggaggagtgggaggccatccacgaggaggtggagcggggagag
accgatgttctcctcgtgagcccggaacgcctcaatgccgtggatttccgcgagcaggtg
ctgcccaagctggctgccacgaccggactgctggtcgtcgacgaggcgcactgcatctcc
gactggggccacgacttccgcccggactaccggcggctgcgcgcgatgctcgccgagctg
cccgccggtgtgccggtcctggccaccaccgcgaccgccaacgcgcgcgtcaccgcggat
gtggccgagcagctgggcaccggcggcggcgaggccttggtgctgcgcggcccgctggac
agggagagcctgcggctcggagtggtccggctgccggacgccgcgcatcgcctgggctgg
ctcgccgagcacctggacgacctgcagggctccgggatcgtctacgccctcacggtggcc
gcggccgaggaagccaccgccttcctgcggcagcgtggcttccgggtggcctcctacacg
gggcgcaccgagaacgccgaccgactgcaggcagaagccgacctgcagcagaaccgcgtc
aaggcgctgatcgcgacctcggcgctgggcatgggcttcgacaaaccggacctgggcttc
gtggtccacctcggttcgccgtcctcgccgatcgcttactaccagcaggtggggcgcgcg
gggcgcggcgtggagcacgccgatgtgctgctgctgccgggcaaggaggacgaggccatc
tggcgctacttcgccgatacggccttcccgcccgaggcgcgggtgcgcgagactctgtcg
gctctcgccggtgcgggacggccgctgtccgtgccggccctggaagccgtcgtcgacctc
cggcgcacccggctggagaccatgctcaaggtgctggacgtggacggagccgtcaaacgt
gtgaagggcggctggatctccacgggagagcagtgggtctacgactccgagcggtacgcc
tgggtcgcccggcagcgggcggccgagcagcaggccatgcgtgactacgtgagcacgacc
cagtgccggatggagttcctgcgccgtcaactggacgacgagggggcggtaccgtgcgga
cgttgcgacaactgcgccggcccttgggtcgattccgacgtctcggcggagacgctgacg
ggagcggtgaaggaactggaccgcccgggcgtggagatcgagccgcgccgcatgtggccg
acggggatgcccgcgctgggtatcgacctcaaggggcgcatcgcggccaaggagcagtgc
tccaccggacgtgccctggggcggctgtcggacatcggctggggcaaccggctgcgcccg
ctgctggccgagaacgcccccgacggtccggtacctgacgatgtcctgcaggccgcggtg
gcggtcctcgccgactgggcgcgctccccgggtggctgggcgcgcgacgtcccggacgcc
tctgcccggccggtgggagtggtcgccgtaccgtccgtgacccgcccgcagttggtcggc
tccctcgcggagggaatcgcgtccgtcggccggctcccgttcctcggcaccctgacgtac
ggcgggcagggcggcgcacatgcggcgcgccgcagcaactccgcccagcggctcagaggt
ctgttcggcgcgttcaccgtttccgaggaactggccggtgcgctggctcgatctcccggc
cccgtcctgctggtcgacgactgcaccgactccggctggaccctcgcggtcgctgcccgg
ctgctacgccaggcaggcgctgagcaggttctcccgctggtcctcgcggcttcgggctga
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